1dc3
;STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dc3 |
| deposition_date | 1999-11-04 |
| title | ;STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES ; |
| keywords | GAPDH, SUBSTRATE, OXIDOREDUCTASE; OXIDOREDUCTASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 28.57 Å |
| rg_electron | 28.15 Å |
| i0 | 81377600.00 |
| molecular_weight | 70801.0 kDa |
| excluded_volume | 88665 ų |
| envelope_volume | 107560 ų |
| shell_volume | 32798 ų |
| envelope_diameter | 96.4 Å |
| shell_rg | 34.58 Å |
| envelope_rg | 28.13 Å |
| shape_rg | 28.15 Å |
| total_rg | 28.74 Å |
| total_atoms | 4976 |
| n_residues | 660 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 94.9 Å |
| rg_real | 28.69 Å |
| rg_real_error | 0.86 Å |
| i0_real | 8.1380e+07 |
| i0_real_error | 1.2800e+06 |
| rg_reciprocal | 28.66 Å |
| i0_reciprocal | 81380000.0000 |
| total_estimate | 0.8745 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 30.5 Å |
| skewness | 0.464 |
| kurtosis | -0.293 |
| angular_range | — – 0.2800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 19280000.0000 |
| n_real_points | 57 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.828; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.947; Smooth: 0.940 |