1dc5
;STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dc5 |
| deposition_date | 1999-11-04 |
| title | ;STRUCTURAL ANALYSIS OF GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE FROM ESCHERICHIA COLI: DIRECT EVIDENCE FOR SUBSTRATE BINDING AND COFACTOR-INDUCED CONFORMATIONAL CHANGES ; |
| keywords | GAPDH, SUBSTRATE, OXIDOREDUCTASE; OXIDOREDUCTASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 28.75 Å |
| rg_electron | 28.06 Å |
| i0 | 82321300.00 |
| molecular_weight | 70801.0 kDa |
| excluded_volume | 88665 ų |
| envelope_volume | 110080 ų |
| shell_volume | 32479 ų |
| envelope_diameter | 89.8 Å |
| shell_rg | 35.39 Å |
| envelope_rg | 27.65 Å |
| shape_rg | 28.05 Å |
| total_rg | 28.83 Å |
| total_atoms | 4976 |
| n_residues | 660 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 89.2 Å |
| rg_real | 28.68 Å |
| rg_real_error | 0.59 Å |
| i0_real | 8.2320e+07 |
| i0_real_error | 1.1740e+06 |
| rg_reciprocal | 28.71 Å |
| i0_reciprocal | 82320000.0000 |
| total_estimate | 0.9124 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 32.4 Å |
| skewness | 0.208 |
| kurtosis | -0.597 |
| angular_range | — – 0.2750 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 13160000.0000 |
| n_real_points | 56 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.965; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.965 |