1dp7
COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dp7 |
| deposition_date | 1999-12-23 |
| title | COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE |
| keywords | ;WINGED HELIX, MHC CLASS II TRANSCRIPTION FACTOR, PROTEIN-DNA COCRYSTAL STRUCTURE, NOVEL MODE OF DNA RECOGNITION, TRANSCRIPTION-DNA COMPLEX ;; TRANSCRIPTION/DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 18.06 Å |
| rg_electron | 16.79 Å |
| i0 | 5731390.00 |
| molecular_weight | 14076.0 kDa |
| excluded_volume | 16137 ų |
| envelope_volume | 21480 ų |
| shell_volume | 11800 ų |
| envelope_diameter | 57.4 Å |
| shell_rg | 21.23 Å |
| envelope_rg | 17.11 Å |
| shape_rg | 16.68 Å |
| total_rg | 17.74 Å |
| total_atoms | 964 |
| n_residues | 90 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 57.4 Å |
| rg_real | 18.04 Å |
| rg_real_error | 0.35 Å |
| i0_real | 5.7310e+06 |
| i0_real_error | 6.7980e+04 |
| rg_reciprocal | 18.05 Å |
| i0_reciprocal | 5731000.0000 |
| total_estimate | 0.9148 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 20.2 Å |
| skewness | 0.213 |
| kurtosis | -0.548 |
| angular_range | — – 0.4400 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 294000.0000 |
| n_real_points | 75 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.968; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.985; Smooth: 0.999 |