1dpy
THREE-DIMENSIONAL STRUCTURE OF A NOVEL PHOSPHOLIPASE A2 FROM INDIAN COMMON KRAIT AT 2.45 A RESOLUTION
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1dpy |
| deposition_date | 1999-12-28 |
| title | THREE-DIMENSIONAL STRUCTURE OF A NOVEL PHOSPHOLIPASE A2 FROM INDIAN COMMON KRAIT AT 2.45 A RESOLUTION |
| keywords | INDIAN COMMON KRAIT VENOM, PHOSPHOLIPASE A2, REFINEMENT, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.00 Å |
| rg_electron | 14.05 Å |
| i0 | 3826220.00 |
| molecular_weight | 12852.0 kDa |
| excluded_volume | 15575 ų |
| envelope_volume | 17657 ų |
| shell_volume | 11023 ų |
| envelope_diameter | 50.6 Å |
| shell_rg | 19.27 Å |
| envelope_rg | 14.31 Å |
| shape_rg | 14.03 Å |
| total_rg | 15.11 Å |
| total_atoms | 889 |
| n_residues | 117 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 49.9 Å |
| rg_real | 14.97 Å |
| rg_real_error | 0.34 Å |
| i0_real | 3.8260e+06 |
| i0_real_error | 4.8160e+04 |
| rg_reciprocal | 14.98 Å |
| i0_reciprocal | 3826000.0000 |
| total_estimate | 0.8867 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 49.3 Å |
| skewness | 0.285 |
| kurtosis | -0.379 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 998000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.855; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.970; Smooth: 0.988 |