THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

Method: X-RAY DIFFRACTION D_max: 173.4 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1dt5
deposition_date	2000-01-11
title	THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE
keywords	lipase, thermomyces linuginosa, interfacial activation, alpha-beta protein, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	53.37 Å
rg_electron	52.99 Å
i0	833086000.00
molecular_weight	234440.0 kDa
excluded_volume	290420 Å³
envelope_volume	435630 Å³
shell_volume	70246 Å³
envelope_diameter	174.5 Å
shell_rg	54.94 Å
envelope_rg	50.41 Å
shape_rg	52.98 Å
total_rg	53.08 Å
total_atoms	16568
n_residues	2152
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	173.4 Å
rg_real	53.20 Å
rg_real_error	1.97 Å
i0_real	8.3310e+08
i0_real_error	1.6910e+07
rg_reciprocal	53.48 Å
i0_reciprocal	833400000.0000
total_estimate	0.8540
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	71.8 Å
skewness	0.052
kurtosis	-0.476
angular_range	— – 0.1450 Å⁻¹
current_alpha	0.0000
highest_alpha	17400000.0000
n_real_points	30
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.794; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.997; Smooth: 0.719

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	85.435 Å
length_b	162.878 Å
length_c	86.717 Å
angle_alpha	90.00 °
angle_beta	98.45 °
angle_gamma	90.00 °
z_pdb	16

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	2.400 Å
resolution_low	20.000 Å
r_factor	—
r_work	0.2440
r_free	0.3150

description	LIPASE
formula_weight	29342.5 kDa
ec_number	3.1.1.3
src_method	nat
entity_count	8

type	polypeptide(L)
strand_id	A,B,C,D,E,F,G,H
atom_count	17081

THE STRUCTURAL ORIGINS OF INTERFACIAL ACTIVATION IN THERMOMYCES (HUMICOLA) LANUGINOSA LIPASE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	513

fit	/app/data/saxs_computation/dt/1dt5/1dt5.fit
pddf	/app/data/pr_computation/dt/1dt5/1dt5.pr.out
profile	/app/data/saxs_computation/dt/1dt5/1dt5.dat