Crystal structure of a Monocot (Maize ZMGlu1) beta-glucosidase

Method: X-RAY DIFFRACTION D_max: 115.6 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1e1e
deposition_date	2000-05-03
title	Crystal structure of a Monocot (Maize ZMGlu1) beta-glucosidase
keywords	GLYCOSIDE HYDROLASE, BETA-GLUCOSIDASE, FAMILY 1, RETENTION OF THE ANOMERIC CONFIGURATION, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	35.31 Å
rg_electron	34.89 Å
i0	193203000.00
molecular_weight	112720.0 kDa
excluded_volume	140780 Å³
envelope_volume	168360 Å³
shell_volume	40935 Å³
envelope_diameter	116.6 Å
shell_rg	40.58 Å
envelope_rg	34.69 Å
shape_rg	34.86 Å
total_rg	35.38 Å
total_atoms	7971
n_residues	985
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	115.6 Å
rg_real	35.50 Å
rg_real_error	0.90 Å
i0_real	1.9320e+08
i0_real_error	3.0250e+06
rg_reciprocal	35.39 Å
i0_reciprocal	193200000.0000
total_estimate	0.8398
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	33.4 Å
skewness	0.418
kurtosis	-0.677
angular_range	— – 0.2250 Å⁻¹
current_alpha	0.0000
highest_alpha	72250000.0000
n_real_points	46
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.720; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.889; Smooth: 0.865

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	62.880 Å
length_b	118.340 Å
length_c	77.100 Å
angle_alpha	90.00 °
angle_beta	90.30 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	2.500 Å
resolution_low	27.000 Å
r_factor	0.2560
r_work	0.2560
r_free	0.3220

description	BETA-GLUCOSIDASE
formula_weight	58472.4 kDa
ec_number	3.2.1.21
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	8302

Crystal structure of a Monocot (Maize ZMGlu1) beta-glucosidase

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	ZEA MAYS
common_name	MAIZE
ncbi_taxonomy_id	4577
host_organism	ESCHERICHIA COLI

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	331

fit	/app/data/saxs_computation/e1/1e1e/1e1e.fit
pddf	/app/data/pr_computation/e1/1e1e/1e1e.pr.out
profile	/app/data/saxs_computation/e1/1e1e/1e1e.dat