← Back to search

1e47

L-Fuculose 1-Phosphate Aldolase from Escherichia coli Mutant E73Q

Method: X-RAY DIFFRACTION D_max: 61.2 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1e47
deposition_date	2000-06-30
title	L-Fuculose 1-Phosphate Aldolase from Escherichia coli Mutant E73Q
keywords	;ALDOLASE (CLASS II), BACTERIAL L-FUCOSE METABOLISM, CLEAVAGE OF L-FUCULOSE 1-PHOSPHATE TO DIHYDROXYACETONE PHOSPHATE AND L-LACTALDEHYDE, MUTANT STRUCTURE ;; ALDOLASE (CLASS II)
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	17.86 Å
rg_electron	17.11 Å
i0	9972410.00
molecular_weight	22999.0 kDa
excluded_volume	28650 Å³
envelope_volume	32870 Å³
shell_volume	16340 Å³
envelope_diameter	63.0 Å
shell_rg	23.01 Å
envelope_rg	17.54 Å
shape_rg	17.12 Å
total_rg	18.02 Å
total_atoms	1608
n_residues	206
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	61.2 Å
rg_real	17.83 Å
rg_real_error	0.40 Å
i0_real	9.9720e+06
i0_real_error	1.1570e+05
rg_reciprocal	17.84 Å
i0_reciprocal	9972000.0000
total_estimate	0.6325
solution_quality	REASONABLE a REASONABLE solution
n_peaks	2
r_peak_primary	21.5 Å
skewness	0.380
kurtosis	-0.114
angular_range	— – 0.4450 Å⁻¹
current_alpha	0.0000
highest_alpha	3348000.0000
n_real_points	75
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.728; Stabil: 1.000; Sysdev: 0.346; Positv: 1.000; Valcen: 0.996; Smooth: 0.000

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (6)

Entity 1 polymer

description	L-FUCULOSE 1-PHOSPHATE ALDOLASE
formula_weight	23804.3 kDa
ec_number	4.1.2.17
mutation	YES
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	P
atom_count	1750

MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSQWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE

Source

organism	ESCHERICHIA COLI
ncbi_taxonomy_id	562
host_organism	ESCHERICHIA COLI

Entity 2 non-polymer

description	SULFATE ION
formula_weight	96.1 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	BETA-MERCAPTOETHANOL
formula_weight	78.1 kDa
src_method	syn
entity_count	1

Entity 4 non-polymer

description	1,3-DIHYDROXYACETONEPHOSPHATE
formula_weight	170.1 kDa
src_method	syn
entity_count	1

Entity 5 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	1

Entity 6 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	117

▶

6. Citations (4)

▶

length_a	93.900 Å
length_b	93.900 Å
length_c	43.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 4 21 2
int_tables_number	90
crystal_system	—

resolution	2.150 Å
resolution_low	10.000 Å
r_factor	—
r_work	0.1500
r_free	0.2050

fit	/app/data/saxs_computation/e4/1e47/1e47.fit
pddf	/app/data/pr_computation/e4/1e47/1e47.pr.out
profile	/app/data/saxs_computation/e4/1e47/1e47.dat