Beta ketoacyl acyl carrier protein synthase II (KASII) from Synechocystis sp.

Method: X-RAY DIFFRACTION D_max: 70.2 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1e5m
deposition_date	2000-07-27
title	Beta ketoacyl acyl carrier protein synthase II (KASII) from Synechocystis sp.
keywords	CONDENSING ENZYME, BIOSYNTHETIC ROLE, CARBON-CARBON BOND FORMATION; CONDENSING ENZYME
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	21.26 Å
rg_electron	20.30 Å
i0	33201100.00
molecular_weight	43439.0 kDa
excluded_volume	53964 Å³
envelope_volume	60705 Å³
shell_volume	24202 Å³
envelope_diameter	71.1 Å
shell_rg	27.82 Å
envelope_rg	20.89 Å
shape_rg	20.29 Å
total_rg	21.23 Å
total_atoms	3043
n_residues	411
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	70.2 Å
rg_real	21.16 Å
rg_real_error	0.31 Å
i0_real	3.3200e+07
i0_real_error	4.1080e+05
rg_reciprocal	21.18 Å
i0_reciprocal	33200000.0000
total_estimate	0.8814
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	25.8 Å
skewness	0.248
kurtosis	-0.310
angular_range	— – 0.3750 Å⁻¹
current_alpha	0.0001
highest_alpha	8429000.0000
n_real_points	69
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.818; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.999

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (2)

▶

6. Citations (1)

▶

length_a	100.800 Å
length_b	100.800 Å
length_c	74.700 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	6

space_group	P 31 2 1
int_tables_number	152
crystal_system	—

resolution	1.540 Å
resolution_low	20.000 Å
r_factor	0.1750
r_work	0.1750
r_free	0.1990

description	BETA KETOACYL ACYL CARRIER PROTEIN SYNTHASE II
formula_weight	44048.0 kDa
ec_number	2.3.1.41
src_method	man
entity_count	1

type	polypeptide(L)
strand_id	A
atom_count	3468

Beta ketoacyl acyl carrier protein synthase II (KASII) from Synechocystis sp.

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	SYNECHOCYSTIS SP.
ncbi_taxonomy_id	1148
host_organism	ESCHERICHIA COLI

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	349

fit	/app/data/saxs_computation/e5/1e5m/1e5m.fit
pddf	/app/data/pr_computation/e5/1e5m/1e5m.pr.out
profile	/app/data/saxs_computation/e5/1e5m/1e5m.dat