SAXSdb — 1ei3

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1. Structure Basics

entry_id	1ei3
deposition_date	2000-02-23
title	CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN
keywords	coiled coils, disulfide rings, fibrin forming entities, BLOOD CLOTTING; BLOOD CLOTTING
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	— Å
rg_electron	155.70 Å
i0	711779000.00
molecular_weight	217750.0 kDa
excluded_volume	262330 Å³
envelope_volume	452460 Å³
shell_volume	32088 Å³
envelope_diameter	454.9 Å
shell_rg	57.75 Å
envelope_rg	147.90 Å
shape_rg	155.80 Å
total_rg	154.80 Å
total_atoms	—
n_residues	—
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	453.3 Å
rg_real	154.20 Å
rg_real_error	4.71 Å
i0_real	7.0970e+08
i0_real_error	2.1010e+07
rg_reciprocal	94.31 Å
i0_reciprocal	595600000.0000
total_estimate	0.7053
solution_quality	REASONABLE a REASONABLE solution
n_peaks	3
r_peak_primary	45.3 Å
skewness	0.405
kurtosis	-1.167
angular_range	— – 0.0500 Å⁻¹
current_alpha	0.1115
highest_alpha	48500000.0000
n_real_points	11
gnom_version	4.1.3
quality_criteria	AN1: 0.003; Oscil: 0.000; Stabil: 0.817; Sysdev: 1.000; Positv: 1.000; Valcen: 0.949; Smooth: 0.814

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	FIBRINOGEN
formula_weight	54288.0 kDa
src_method	nat
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,D
atom_count	1896

QDGKTTFEKEGGGGRGPRILENMHESSCKYEKNWPICVDDDWGTKCPSCCRMQGIIDDTDQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQVDKEGYDNIQKHLTQASSIDMHPDFQTTTLSTLKMRPLKDSNVPEHFKLKPSPEMQAMSAFNNIKQMQVVLERPETDHVAEARGDSSPSHTGKLITSSHRRESPSLVDKTSSASSVHRCTRTVTKKVISGPDGPREEIVEKMVSSDGSDCSHLQGGREGSTYHFSGTGDFHKLDRLLPDLESFFTHDSVSTSSRHSIGSSTSSHVTGAGSSHLGTGGKDKFTDLGEEEEDDFGGLQPSGFAAGSASHSKTVLTSSSSSFNKGGSTFETKSLKTRETSEQLGGVQHDQSAEDTPDFKARSFRPAAMSTRRSYNGKGTQK

Entity 2 polymer

description	FIBRINOGEN
formula_weight	52874.3 kDa
src_method	nat
entity_count	2

Polymer

type	polypeptide(L)
strand_id	B,E

QASVEYDNEEDSPQIDARAHRPLDKRQEAAPTLRPVAPPISGTGYQPRPPKQDKQAMKKGPIIYPDAGGCKHPLDELGVLCPTGCELQTTLLKQEKTVKPVLRDLKDRVAKFSDTSTTMYQYVNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYIKDNLDNNIPSSLRVLRAVIDSLHKKIQKLENAIATQTDYCRSPCVASCNIPVVSGRECEDIYRKGGETSEMYIIQPDPFTTPYRVYCDMETDNGGWTLIQNRQDGSVNFGRAWDEYKRGFGNIAKSGGKKYCDTPGEYWLGNDKISQLTKIGPTKVLIEMEDWNGDKVSALYGGFTIHNEGNKYQLSVSNYKGNAGNALMEGASQLYGENRTMTIHNGMYFSTYDRDNDGWLTTDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGTYSWDMAKHGTDDGIVWMNWKGSWYSMKKMSMKIKPYFPD

Entity 3 polymer

description	FIBRINOGEN
formula_weight	47000.1 kDa
src_method	nat
entity_count	2

Polymer

type	polypeptide(L)
strand_id	C,F

YIATRENCCILDERFGSYCPTTCGIADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLESHCQEPCKDTAEIQETTGRDCQDIANKGARKSGLYFIKPQKAKQSFLVYCEIDTYGNGWTVLQRRLDGSEDFRRNWVQYKEGFGHLSPDDTTEFWLGNEKIHLITTQSTLPYALRIELEDWSGKKGTADYAVFKVGTEEDKYRLTYAYFIGGERGDAFDGFNFGDDPSDKSYTYHNGMRFSTFDNDNDNFEGNCAEQDGSGWWMNRCHAGHLNGPYYIGGVYSRDTGTNSYDNGIIWATWRDRWYSMKKTTMKIIPFNRLSIDGQQHSGGLKQVGDS

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6. Citations (3)

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length_a	114.726 Å
length_b	101.849 Å
length_c	210.232 Å
angle_alpha	90.00 °
angle_beta	106.71 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	5.500 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

fit	/app/data/saxs_computation/ei/1ei3/1ei3.fit
pddf	/app/data/pr_computation/ei/1ei3/1ei3.pr.out
profile	/app/data/saxs_computation/ei/1ei3/1ei3.dat

CRYSTAL STRUCTURE OF NATIVE CHICKEN FIBRINOGEN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (3)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

Entity 3 polymer

Polymer

6. Citations (3)

7. Files & Curves (10)

Files (7)

Curves (3)