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1eix

;STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM E. COLI, CO-CRYSTALLISED WITH THE INHIBITOR BMP ;

Method: X-RAY DIFFRACTION D_max: 103.3 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1eix
deposition_date	2000-02-29
title	;STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM E. COLI, CO-CRYSTALLISED WITH THE INHIBITOR BMP ;
keywords	alpha-beta-barrel, protein-inhibitor complex, homodimer, LYASE; LYASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	33.62 Å
rg_electron	32.84 Å
i0	162217000.00
molecular_weight	101200.0 kDa
excluded_volume	126330 Å³
envelope_volume	154370 Å³
shell_volume	38160 Å³
envelope_diameter	102.8 Å
shell_rg	40.66 Å
envelope_rg	32.34 Å
shape_rg	32.81 Å
total_rg	33.49 Å
total_atoms	7095
n_residues	925
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	103.3 Å
rg_real	33.59 Å
rg_real_error	0.81 Å
i0_real	1.6220e+08
i0_real_error	2.5250e+06
rg_reciprocal	33.61 Å
i0_reciprocal	162200000.0000
total_estimate	0.8999
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	30.8 Å
skewness	0.179
kurtosis	-0.833
angular_range	— – 0.2350 Å⁻¹
current_alpha	0.0000
highest_alpha	72860000.0000
n_real_points	48
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.938; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.967; Smooth: 0.915

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	;OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE ;
formula_weight	26378.2 kDa
ec_number	4.1.1.23
src_method	man
entity_count	4

Polymer

type	polypeptide(L)
strand_id	A,B,C,D
atom_count	7474

MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA

Source

organism	Escherichia coli
ncbi_taxonomy_id	562
host_organism	Escherichia coli

Entity 2 non-polymer

description	;1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID ;
formula_weight	340.2 kDa
src_method	syn
entity_count	4

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	379

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6. Citations (1)

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length_a	61.280 Å
length_b	95.920 Å
length_c	145.020 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	16

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.500 Å
resolution_low	30.000 Å
r_factor	0.1940
r_work	0.1910
r_free	0.2640

fit	/app/data/saxs_computation/ei/1eix/1eix.fit
pddf	/app/data/pr_computation/ei/1eix/1eix.pr.out
profile	/app/data/saxs_computation/ei/1eix/1eix.dat

;STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM E. COLI, CO-CRYSTALLISED WITH THE INHIBITOR BMP ;

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction