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1eu8

STRUCTURE OF TREHALOSE MALTOSE BINDING PROTEIN FROM THERMOCOCCUS LITORALIS

Method: X-RAY DIFFRACTION D_max: 71.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1eu8
deposition_date	2000-04-14
title	STRUCTURE OF TREHALOSE MALTOSE BINDING PROTEIN FROM THERMOCOCCUS LITORALIS
keywords	;TREHALOSE-MALTOSE BINDING PROTEIN, PROTEIN-CARBOHYDRATE COMPLEX, MBP 2 FOLD, ABC TRANSPORTER FOLD, THERMOPHILIC PROTEIN, SUGAR BINDING PROTEIN ;; SUGAR BINDING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	22.42 Å
rg_electron	21.32 Å
i0	36478600.00
molecular_weight	47189.0 kDa
excluded_volume	58919 Å³
envelope_volume	65542 Å³
shell_volume	25141 Å³
envelope_diameter	73.3 Å
shell_rg	28.63 Å
envelope_rg	21.69 Å
shape_rg	21.25 Å
total_rg	22.36 Å
total_atoms	3298
n_residues	407
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	71.7 Å
rg_real	22.34 Å
rg_real_error	0.30 Å
i0_real	3.6480e+07
i0_real_error	4.3890e+05
rg_reciprocal	22.36 Å
i0_reciprocal	36480000.0000
total_estimate	0.8968
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	26.1 Å
skewness	0.252
kurtosis	-0.394
angular_range	— – 0.3550 Å⁻¹
current_alpha	0.0000
highest_alpha	7296000.0000
n_real_points	67
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.886; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.996; Smooth: 0.999

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4. Crystallography & Experiment

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5. Entities & Polymer Info (5)

Entity 1 polymer

description	TREHALOSE/MALTOSE BINDING PROTEIN
formula_weight	46411.3 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	3585

IEEGKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGERETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKEAEELVKQYS

Source

organism	Thermococcus litoralis
ncbi_taxonomy_id	2265
host_organism	Escherichia coli

Entity 2 branched

description	alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
formula_weight	342.3 kDa
src_method	man
entity_count	1

Entity 3 non-polymer

description	PLATINUM (II) ION
formula_weight	195.1 kDa
src_method	syn
entity_count	3

Entity 4 non-polymer

description	CHLORIDE ION
formula_weight	35.5 kDa
src_method	syn
entity_count	5

Entity 5 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	287

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6. Citations (1)

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length_a	59.243 Å
length_b	81.526 Å
length_c	86.455 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	1.900 Å
resolution_low	20.000 Å
r_factor	0.1990
r_work	0.1980
r_free	0.2320

fit	/app/data/saxs_computation/eu/1eu8/1eu8.fit
pddf	/app/data/pr_computation/eu/1eu8/1eu8.pr.out
profile	/app/data/saxs_computation/eu/1eu8/1eu8.dat