GLUTAMATE DEHYDROGENASE FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGATED STATE

Method: X-RAY DIFFRACTION D_max: 133.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1euz
deposition_date	2000-04-19
title	GLUTAMATE DEHYDROGENASE FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGATED STATE
keywords	GLUTAMATE, HYPERTHERMOSTABILITY, domain closure movement, OXIDOREDUCTASE; OXIDOREDUCTASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	41.65 Å
rg_electron	40.99 Å
i0	1097630000.00
molecular_weight	275950.0 kDa
excluded_volume	346420 Å³
envelope_volume	424510 Å³
shell_volume	82558 Å³
envelope_diameter	136.9 Å
shell_rg	48.33 Å
envelope_rg	41.14 Å
shape_rg	40.98 Å
total_rg	41.35 Å
total_atoms	19422
n_residues	2497
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	133.1 Å
rg_real	41.47 Å
rg_real_error	0.88 Å
i0_real	1.0980e+09
i0_real_error	1.6670e+07
rg_reciprocal	41.65 Å
i0_reciprocal	1098000000.0000
total_estimate	0.8807
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	52.6 Å
skewness	0.205
kurtosis	-0.348
angular_range	— – 0.1900 Å⁻¹
current_alpha	0.0000
highest_alpha	162100000.0000
n_real_points	39
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.871; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.970; Smooth: 0.862

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	112.480 Å
length_b	163.120 Å
length_c	132.190 Å
angle_alpha	90.00 °
angle_beta	113.20 °
angle_gamma	90.00 °
z_pdb	12

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	2.250 Å
resolution_low	8.000 Å
r_factor	0.1870
r_work	0.1870
r_free	0.2500

description	GLUTAMATE DEHYDROGENASE
formula_weight	46758.5 kDa
ec_number	1.4.1.2
src_method	man
entity_count	6

type	polypeptide(L)
strand_id	A,B,C,D,E,F
atom_count	19422

GLUTAMATE DEHYDROGENASE FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGATED STATE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Thermococcus profundus
ncbi_taxonomy_id	49899
host_organism	Escherichia coli

description	SULFATE ION
formula_weight	96.1 kDa
src_method	syn
entity_count	17

fit	/app/data/saxs_computation/eu/1euz/1euz.fit
pddf	/app/data/pr_computation/eu/1euz/1euz.pr.out
profile	/app/data/saxs_computation/eu/1euz/1euz.dat