L-3-HYDROXYACYL-COA DEHYDROGENASE (APO)

Method: X-RAY DIFFRACTION D_max: 92.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1f14
deposition_date	2000-05-18
title	L-3-HYDROXYACYL-COA DEHYDROGENASE (APO)
keywords	L-3-hydroxyacyl-CoA (apoenzyme), OXIDOREDUCTASE; OXIDOREDUCTASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	29.01 Å
rg_electron	28.10 Å
i0	61492000.00
molecular_weight	63420.0 kDa
excluded_volume	80385 Å³
envelope_volume	100140 Å³
shell_volume	30650 Å³
envelope_diameter	96.4 Å
shell_rg	34.73 Å
envelope_rg	28.00 Å
shape_rg	28.08 Å
total_rg	28.83 Å
total_atoms	4462
n_residues	582
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	92.7 Å
rg_real	29.07 Å
rg_real_error	0.52 Å
i0_real	6.1490e+07
i0_real_error	8.9010e+05
rg_reciprocal	29.05 Å
i0_reciprocal	61490000.0000
total_estimate	0.8912
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	30.4 Å
skewness	0.387
kurtosis	-0.457
angular_range	— – 0.2750 Å⁻¹
current_alpha	0.0001
highest_alpha	10340000.0000
n_real_points	56
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.922; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.945; Smooth: 0.871

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (2)

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length_a	50.440 Å
length_b	86.970 Å
length_c	168.290 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

resolution	2.300 Å
resolution_low	20.000 Å
r_factor	—
r_work	0.2130
r_free	0.2670

description	L-3-HYDROXYACYL-COA DEHYDROGENASE
formula_weight	33895.8 kDa
ec_number	1.1.1.35
mutation	F80C
src_method	man
entity_count	2

type	polypeptide(L)
strand_id	A,B
atom_count	4749

L-3-HYDROXYACYL-COA DEHYDROGENASE (APO)

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 water

6. Citations (2)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Escherichia coli

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	287

fit	/app/data/saxs_computation/f1/1f14/1f14.fit
pddf	/app/data/pr_computation/f1/1f14/1f14.pr.out
profile	/app/data/saxs_computation/f1/1f14/1f14.dat