← Back to search

1f35

CRYSTAL STRUCTURE OF MURINE OLFACTORY MARKER PROTEIN

Method: X-RAY DIFFRACTION D_max: 87.0 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1f35
deposition_date	2000-05-31
title	CRYSTAL STRUCTURE OF MURINE OLFACTORY MARKER PROTEIN
keywords	BETA, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, SIGNALING PROTEIN; SIGNALING PROTEIN
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	24.69 Å
rg_electron	23.68 Å
i0	27813000.00
molecular_weight	38731.0 kDa
excluded_volume	47540 Å³
envelope_volume	60178 Å³
shell_volume	21800 Å³
envelope_diameter	89.3 Å
shell_rg	29.75 Å
envelope_rg	24.02 Å
shape_rg	23.66 Å
total_rg	24.47 Å
total_atoms	2653
n_residues	314
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	87.0 Å
rg_real	24.72 Å
rg_real_error	0.62 Å
i0_real	2.7810e+07
i0_real_error	4.3220e+05
rg_reciprocal	24.72 Å
i0_reciprocal	27810000.0000
total_estimate	0.8663
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	27.6 Å
skewness	0.351
kurtosis	-0.292
angular_range	— – 0.3200 Å⁻¹
current_alpha	0.0000
highest_alpha	2801000.0000
n_real_points	64
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.808; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.873; Smooth: 0.959

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (4)

Entity 1 polymer

description	OLFACTORY MARKER PROTEIN
formula_weight	18991.8 kDa
mutation	M13(MSE), M25(MSE), M95(MSE), M115(MSE), M139(MSE)
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,B
atom_count	2829

AEDGPQKQQLEMPLVLDQDLTQQMRLRVESLKQRGEKKQDGEKLIRPAESVYRLDFIQQQKLQFDHWNVVLDKPGKVTITGTSQNWTPDLTNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFNQL

Source

organism	Mus musculus
common_name	mouse
ncbi_taxonomy_id	10090
host_organism	Escherichia coli

Entity 2 non-polymer

description	ZINC ION
formula_weight	65.4 kDa
src_method	syn
entity_count	10

Entity 3 non-polymer

description	CACODYLATE ION
formula_weight	137.0 kDa
src_method	syn
entity_count	1

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	176

▶

6. Citations (1)

▶

length_a	87.270 Å
length_b	87.270 Å
length_c	164.100 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

space_group	P 32 2 1
int_tables_number	154
crystal_system	—

resolution	2.300 Å
resolution_low	100.000 Å
r_factor	—
r_work	0.2100
r_free	0.2470

fit	/app/data/saxs_computation/f3/1f35/1f35.fit
pddf	/app/data/pr_computation/f3/1f35/1f35.pr.out
profile	/app/data/saxs_computation/f3/1f35/1f35.dat

CRYSTAL STRUCTURE OF MURINE OLFACTORY MARKER PROTEIN

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction