Saccharomyces cerevisiae
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | water × 1 | Consistent with protein count |
| UniProt name | GYP1_YEAST |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 2–390； UniProt 249–637 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1fkm |
| Deposition date deposition_date | 2000-08-09 |
| Structure title title | CRYSTAL STRUCTURE OF THE YPT/RAB-GAP DOMAIN OF GYP1P |
| Keywords keywords | GAP, YPT/RAB PROTEIN, VESICULAR TRAFFICKING, ENDOCYTOSIS, HYDROLASE, GTPASE ACTIVATION, ENDOCYTOSIS-EXOCYTOSIS COMPLEX; ENDOCYTOSIS/EXOCYTOSIS |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 21.76 Å |
| Rg (electron density) | 20.50 Å |
| Total Rg | 21.37 Å |
| Atom count | 2718 |
| Residues | 314 |
| Excluded volume | 48659 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1fkma1 |
| Class class | a — All alpha proteins |
| Fold Fold fold | a.69 — Left-handed superhelix |
| Superfamily Superfamily superfamily | a.69.2 — Ypt/Rab-GAP domain of gyp1p |
| Family Family family | a.69.2.1 — Ypt/Rab-GAP domain of gyp1p |
| Domain ID domain_id | d1fkma2 |
| Class class | a — All alpha proteins |
| Fold Fold fold | a.69 — Left-handed superhelix |
| Superfamily Superfamily superfamily | a.69.2 — Ypt/Rab-GAP domain of gyp1p |
| Family Family family | a.69.2.1 — Ypt/Rab-GAP domain of gyp1p |
| Domain ID domain_id | 1fkmA02 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 472 — Cyclin A; domain 1 |
| Homologous superfamily homologous superfamily | 80 — Ypt/Rab-GAP domain of gyp1p, domain 3 |