Pyrobaculum aerophilum
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 4 | water × 4 | Consistent with protein count |
| UniProt name | Q8ZUR7_PYRAE |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 50–369； UniProt 1–320 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1ik6 |
| Deposition date deposition_date | 2001-05-02 |
| Structure title title | 3D structure of the E1beta subunit of pyruvate dehydrogenase from the archeon Pyrobaculum aerophilum |
| Keywords keywords | e1beta, pyruvate dehydrogenase, tetramer, gxxxg, OXIDOREDUCTASE; OXIDOREDUCTASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 35.59 Å |
| Rg (electron density) | 34.78 Å |
| Total Rg | 35.39 Å |
| Atom count | 8388 |
| Residues | 1136 |
| Excluded volume | 151190 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1ik6a1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.36 — Thiamin diphosphate-binding fold (THDP-binding) |
| Superfamily Superfamily superfamily | c.36.1 — Thiamin diphosphate-binding fold (THDP-binding) |
| Family Family family | c.36.1.7 — Branched-chain alpha-keto acid dehydrogenase Pyr module |
| Domain ID domain_id | d1ik6a2 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.48 — TK C-terminal domain-like |
| Superfamily Superfamily superfamily | c.48.1 — TK C-terminal domain-like |
| Family Family family | c.48.1.2 — Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |
| Domain ID domain_id | 1ik6A01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 50 — Rossmann fold |
| Homologous superfamily homologous superfamily | 970 — Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains |
| Domain ID domain_id | 1ik6A02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 50 — Rossmann fold |
| Homologous superfamily homologous superfamily | 920 — |