1jy2

Crystal Structure of the Central Region of Bovine Fibrinogen (E5 fragment) at 1.4 Angstroms Resolution

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

FIBRINOGEN BETA CHAIN

物种未注明

UniProt P02676

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 6 FIBRINOGEN ALPHA CHAIN × 2 FIBRINOGEN GAMMA-B CHAIN × 2 (P12799) water × 6 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 FIBB_BOVIN
Isoform —
PDB实体 2
链与序列区间 作者链 O; PDB构建体 1–56; UniProt 61–116 作者链 R; PDB构建体 1–56; UniProt 61–116

FIBRINOGEN GAMMA-B CHAIN

物种未注明

UniProt P12799

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 6 FIBRINOGEN ALPHA CHAIN × 2 FIBRINOGEN BETA CHAIN × 2 (P02676) water × 6 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 FIBG_BOVIN
Isoform —
PDB实体 3
链与序列区间 作者链 P; PDB构建体 1–48; UniProt 25–72 作者链 S; PDB构建体 1–48; UniProt 25–72

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1jy2
沉积日期 deposition_date2001-09-10
结构标题 titleCrystal Structure of the Central Region of Bovine Fibrinogen (E5 fragment) at 1.4 Angstroms Resolution
关键词 keywordsfibrinogen, fragment E, disulfide bonds, asymmetry, coiled-coil, beta-sheet, BLOOD CLOTTING; BLOOD CLOTTING
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1jy2__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1jy2__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1jy2__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)23.52 Å
Rg(电子密度)23.79 Å
总 Rg24.02 Å
原子数2196
残基数278
排除体积38575 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1jy2__assembly_1__model_1 hexameric (6) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (4)

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6. 折叠分类 (SCOP + CATH) 12 domains

SCOP 2.08 (6 domains)

结构域编号 domain_idd1jy2n_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions
结构域编号 domain_idd1jy2o_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions
结构域编号 domain_idd1jy2p_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions
结构域编号 domain_idd1jy2q_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions
结构域编号 domain_idd1jy2r_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions
结构域编号 domain_idd1jy2s_
类 Class classh — Coiled coil proteins
折叠类型 Fold foldh.1 — Parallel coiled-coil
超家族 Superfamily superfamilyh.1.8 — Fibrinogen coiled-coil and central regions
家族 Family familyh.1.8.1 — Fibrinogen coiled-coil and central regions

CATH v4.4 (6 domains)

结构域编号 domain_id1jy2N00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
结构域编号 domain_id1jy2O00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
结构域编号 domain_id1jy2P00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
结构域编号 domain_id1jy2Q00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
结构域编号 domain_id1jy2R00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
结构域编号 domain_id1jy2S00
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
同源超家族 H-superfamily homologous superfamily50 —
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7. 引用文献 (2)