1ogl

The crystal structure of native Trypanosoma cruzi dUTPase

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

DEOXYURIDINE TRIPHOSPHATASE

TRYPANOSOMA CRUZI

UniProt O15923

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 2 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name O15923
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–283; UniProt 1–283

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1ogl
Deposition date deposition_date2003-05-07
Structure title titleThe crystal structure of native Trypanosoma cruzi dUTPase
Keywords keywordsHYDROLASE, DUTPASE, TRYPANOSOMA CRUZI, NATIVE, DIMER; HYDROLASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1ogl__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1ogl__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1ogl__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)27.21 Å
Rg (electron density)26.21 Å
Total Rg27.04 Å
Atom count4006
Residues492
Excluded volume71522 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1ogl__assembly_1__model_1 dimeric (2) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 3 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1ogla_
Class classa — All alpha proteins
Fold Fold folda.204 — all-alpha NTP pyrophosphatases
Superfamily Superfamily superfamilya.204.1 — all-alpha NTP pyrophosphatases
Family Family familya.204.1.1 — Type II deoxyuridine triphosphatase

CATH v4.4 (2 domains)

Domain ID domain_id1oglA01
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1680 — all-alpha NTP pyrophosphatases
Homologous superfamily homologous superfamily10 — Type II deoxyuridine triphosphatase
Domain ID domain_id1oglA02
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology1670 — all-alpha NTP pyrophosphatase
Homologous superfamily homologous superfamily10 — Type II deoxyuridine triphosphatase
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7. Citations (1)