1p2z

Refinement of Adenovirus Type 2 Hexon with CNS

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Hexon protein

OrganismNot specified

UniProt P03277

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 3 CITRIC ACID × 15 water × 3 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name HEX_ADE02
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–967; UniProt 1–967

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1p2z
Deposition date deposition_date2003-04-16
Structure title titleRefinement of Adenovirus Type 2 Hexon with CNS
Keywords keywordsADENOVIRUS, TYPE 2, HEXON, VIRUS, JELLYROLL, COAT PROTEIN, Viral protein; VIRAL PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1p2z__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1p2z__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1p2z__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)41.13 Å
Rg (electron density)40.42 Å
Total Rg40.78 Å
Atom count20937
Residues2661
Excluded volume368830 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1p2z__assembly_1__model_1 trimeric (3) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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6. Fold Classification (SCOP + CATH) 6 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1p2za1
Class classb — All beta proteins
Fold Fold foldb.121 — Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily Superfamily superfamilyb.121.2 — Group II dsDNA viruses VP
Family Family familyb.121.2.2 — Adenovirus hexon
Domain ID domain_idd1p2za2
Class classb — All beta proteins
Fold Fold foldb.121 — Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily Superfamily superfamilyb.121.2 — Group II dsDNA viruses VP
Family Family familyb.121.2.2 — Adenovirus hexon

CATH v4.4 (4 domains)

Domain ID domain_id1p2zA01
Class class2 — Mainly Beta
Architecture architecture170 — Beta Complex
Topology topology9 — Adenovirus Type 2 Hexon; domain 1
Homologous superfamily homologous superfamily10 — Adenovirus Type 2 Hexon, domain 1
Domain ID domain_id1p2zA02
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology39 — Hexon Major Viral Coat Protein; domain 2
Homologous superfamily homologous superfamily10 — Hexon Major Viral Coat Protein, domain 2
Domain ID domain_id1p2zA03
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology249 — Hexon Major Viral Coat Protein; domain 3
Homologous superfamily homologous superfamily10 — Hexon Major Viral Coat Protein, domain 3
Domain ID domain_id1p2zA04
Class class2 — Mainly Beta
Architecture architecture70 — Distorted Sandwich
Topology topology9 — Adenovirus Type 2 Hexon; domain 4
Homologous superfamily homologous superfamily10 — Adenovirus Type 2 Hexon, domain 4
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7. Citations (4)