Clostridium perfringens
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 2 | water × 2 | Consistent with protein count |
| UniProt name | TACY_CLOPE |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–500； UniProt 1–500 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1pfo |
| Deposition date deposition_date | 1997-07-31 |
| Structure title title | PERFRINGOLYSIN O |
| Keywords keywords | TOXIN, THIOL-ACTIVATED CYTOLYSIN, HEMOLYSIS, CYTOLYSIS; TOXIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 39.44 Å |
| Rg (electron density) | 40.05 Å |
| Total Rg | 40.14 Å |
| Atom count | 7410 |
| Residues | 942 |
| Excluded volume | 131380 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d1pfoa1 |
| Class class | f — Membrane and cell surface proteins and peptides |
| Fold Fold fold | f.69 — Perfringolysin N-terminal-like |
| Superfamily Superfamily superfamily | f.69.1 — Perfringolysin N-terminal-like |
| Family Family family | f.69.1.1 — Perfringolysin N-terminal-like |
| Domain ID domain_id | d1pfoa2 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.183 — Perfringolysin C-terminal-like |
| Superfamily Superfamily superfamily | b.183.1 — Perfringolysin C-terminal-like |
| Family Family family | b.183.1.1 — Perfringolysin C-terminal-like |
| Domain ID domain_id | 1pfoA01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 90 — Alpha-Beta Complex |
| Topology topology | 840 — HIV-1 Reverse Transcriptase; Chain A, domain 3 |
| Homologous superfamily homologous superfamily | 10 — Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain |
| Domain ID domain_id | 1pfoA02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 30 — 2-Layer Sandwich |
| Topology topology | 1040 — Carboxypeptidase Inhibitor; Chain A |
| Homologous superfamily homologous superfamily | 20 — |
| Domain ID domain_id | 1pfoA03 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 30 — Glutaredoxin |
| Homologous superfamily homologous superfamily | 40 — Perfringolysin |
| Domain ID domain_id | 1pfoA04 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 60 — Sandwich |
| Topology topology | 40 — Immunoglobulin-like |
| Homologous superfamily homologous superfamily | 1430 — Perfringolysin, domain 4 |