1rov

Lipoxygenase-3 Treated with Cumene Hydroperoxide

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Seed lipoxygenase-3

OrganismNot specified

UniProt P09186

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 FE (III) ION × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name LOX3_SOYBN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–857; UniProt 1–857

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1rov
Deposition date deposition_date2003-12-02
Structure title titleLipoxygenase-3 Treated with Cumene Hydroperoxide
Keywords keywordsBETA HYDROXYLATION, OXIDOREDUCTASE; OXIDOREDUCTASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1rov__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1rov__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1rov__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)29.26 Å
Rg (electron density)28.40 Å
Total Rg29.21 Å
Atom count6699
Residues834
Excluded volume119210 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1rov__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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6. Fold Classification (SCOP + CATH) 7 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd1rova1
Class classa — All alpha proteins
Fold Fold folda.119 — Lipoxigenase
Superfamily Superfamily superfamilya.119.1 — Lipoxigenase
Family Family familya.119.1.1 — Plant lipoxigenases
Domain ID domain_idd1rova2
Class classb — All beta proteins
Fold Fold foldb.12 — Lipase/lipooxygenase domain (PLAT/LH2 domain)
Superfamily Superfamily superfamilyb.12.1 — Lipase/lipooxygenase domain (PLAT/LH2 domain)
Family Family familyb.12.1.1 — Lipoxigenase N-terminal domain

CATH v4.4 (5 domains)

Domain ID domain_id1rovA01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology60 — Lipoxygenase-1
Homologous superfamily homologous superfamily20 — PLAT/LH2 domain
Domain ID domain_id1rovA02
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology375 — Lipoxygenase-1; domain 2
Homologous superfamily homologous superfamily10 — Lipoxygenase-1; Domain 2
Domain ID domain_id1rovA03
Class class4 — Few Secondary Structures
Architecture architecture10 — Irregular
Topology topology372 — Lipoxygenase-1; domain 3
Homologous superfamily homologous superfamily10 — Lipoxygenase-1; Domain 3
Domain ID domain_id1rovA04
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology450 — Nuclear Transport Factor 2; Chain: A,
Homologous superfamily homologous superfamily60 —
Domain ID domain_id1rovA05
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology245 — Lipoxygenase-1; domain 5
Homologous superfamily homologous superfamily10 — Lipoxygenase-1; Domain 5
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7. Citations (1)