1uyo

Translocator domain of autotransporter NalP from Neisseria meningitidis

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

NALP

NEISSERIA MENINGITIDIS

UniProt Q8GKS5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 PENTAETHYLENE GLYCOL MONODECYL ETHER × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8GKS5
Isoform —
PDB entities 1
Chains and sequence ranges Author chain X; PDBConstruct 1–308; UniProt 776–1083

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1uyo
Deposition date deposition_date2004-03-02
Structure title titleTranslocator domain of autotransporter NalP from Neisseria meningitidis
Keywords keywordsAUTOTRANSPORTER, TRANSLOCATOR DOMAIN, MEMBRANE PROTEIN, OUTER MEMBRANE, BETA-DOMAIN, BETA-BARREL; MEMBRANE PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1uyo__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1uyo__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1uyo__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)20.26 Å
Rg (electron density)19.65 Å
Total Rg20.33 Å
Atom count1968
Residues272
Excluded volume34388 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1uyo__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd1uyox_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.4 — Transmembrane beta-barrels
Superfamily Superfamily superfamilyf.4.5 — Autotransporter
Family Family familyf.4.5.1 — Autotransporter

CATH v4.4 (1 domains)

Domain ID domain_id1uyoX00
Class class2 — Mainly Beta
Architecture architecture40 — Beta Barrel
Topology topology128 — Lipocalin
Homologous superfamily homologous superfamily130 — Autotransporter beta-domain
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7. Citations (1)