物种未注明
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 6 | naphthalene dioxygenase small subunit × 3 （Q9WVZ0） FE (III) ION × 3 FE2/S2 (INORGANIC) CLUSTER × 3 (4S)-2-METHYL-2,4-PENTANEDIOL × 13 water × 6 | 与蛋白数一致 |
| UniProt名称 | Q9X3R9_9NOCA |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–470； UniProt 1–470 作者链 C； PDB构建体 1–470； UniProt 1–470 作者链 E； PDB构建体 1–470； UniProt 1–470 |
物种未注明
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 6 | naphthalene dioxygenase large subunit × 3 （Q9X3R9） FE (III) ION × 3 FE2/S2 (INORGANIC) CLUSTER × 3 (4S)-2-METHYL-2,4-PENTANEDIOL × 13 water × 6 | 与蛋白数一致 |
| UniProt名称 | Q9WVZ0_9NOCA |
| Isoform | — |
| PDB实体 | 2 |
| 链与序列区间 | 作者链 B； PDB构建体 1–172； UniProt 1–172 作者链 D； PDB构建体 1–172； UniProt 1–172 作者链 F； PDB构建体 1–172； UniProt 1–172 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 2b1x |
| 沉积日期 deposition_date | 2005-09-16 |
| 结构标题 title | Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp. |
| 关键词 keywords | RIESKE NON-HEME IRON OXYGENASE, OXIDOREDUCTASE; OXIDOREDUCTASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 35.87 Å |
| Rg（电子密度） | 35.01 Å |
| 总 Rg | 35.45 Å |
| 原子数 | 14681 |
| 残基数 | 1824 |
| 排除体积 | 259620 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d2b1xa1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.33 — ISP domain |
| 超家族 Superfamily superfamily | b.33.1 — ISP domain |
| 家族 Family family | b.33.1.2 — Ring hydroxylating alpha subunit ISP domain |
| 结构域编号 domain_id | d2b1xa2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.129 — TBP-like |
| 超家族 Superfamily superfamily | d.129.3 — Bet v1-like |
| 家族 Family family | d.129.3.3 — Ring hydroxylating alpha subunit catalytic domain |
| 结构域编号 domain_id | d2b1xb1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.17 — Cystatin-like |
| 超家族 Superfamily superfamily | d.17.4 — NTF2-like |
| 家族 Family family | d.17.4.4 — Ring hydroxylating beta subunit |
| 结构域编号 domain_id | d2b1xc1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.33 — ISP domain |
| 超家族 Superfamily superfamily | b.33.1 — ISP domain |
| 家族 Family family | b.33.1.2 — Ring hydroxylating alpha subunit ISP domain |
| 结构域编号 domain_id | d2b1xc2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.129 — TBP-like |
| 超家族 Superfamily superfamily | d.129.3 — Bet v1-like |
| 家族 Family family | d.129.3.3 — Ring hydroxylating alpha subunit catalytic domain |
| 结构域编号 domain_id | d2b1xd_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.17 — Cystatin-like |
| 超家族 Superfamily superfamily | d.17.4 — NTF2-like |
| 家族 Family family | d.17.4.0 — automated matches |
| 结构域编号 domain_id | d2b1xe1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.33 — ISP domain |
| 超家族 Superfamily superfamily | b.33.1 — ISP domain |
| 家族 Family family | b.33.1.2 — Ring hydroxylating alpha subunit ISP domain |
| 结构域编号 domain_id | d2b1xe2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.129 — TBP-like |
| 超家族 Superfamily superfamily | d.129.3 — Bet v1-like |
| 家族 Family family | d.129.3.3 — Ring hydroxylating alpha subunit catalytic domain |
| 结构域编号 domain_id | d2b1xf_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.17 — Cystatin-like |
| 超家族 Superfamily superfamily | d.17.4 — NTF2-like |
| 家族 Family family | d.17.4.0 — automated matches |
| 结构域编号 domain_id | 2b1xA01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 380 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 结构域编号 domain_id | 2b1xA02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 102 — 3-layer Sandwich |
| 拓扑 Topology topology | 10 — Rieske Iron-sulfur Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Rieske [2Fe-2S] iron-sulphur domain |
| 结构域编号 domain_id | 2b1xB00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 450 — Nuclear Transport Factor 2; Chain: A, |
| 同源超家族 H-superfamily homologous superfamily | 50 — |
| 结构域编号 domain_id | 2b1xC01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 380 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 结构域编号 domain_id | 2b1xC02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 102 — 3-layer Sandwich |
| 拓扑 Topology topology | 10 — Rieske Iron-sulfur Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Rieske [2Fe-2S] iron-sulphur domain |
| 结构域编号 domain_id | 2b1xD00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 450 — Nuclear Transport Factor 2; Chain: A, |
| 同源超家族 H-superfamily homologous superfamily | 50 — |
| 结构域编号 domain_id | 2b1xE01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 380 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 |
| 结构域编号 domain_id | 2b1xE02 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 102 — 3-layer Sandwich |
| 拓扑 Topology topology | 10 — Rieske Iron-sulfur Protein |
| 同源超家族 H-superfamily homologous superfamily | 10 — Rieske [2Fe-2S] iron-sulphur domain |
| 结构域编号 domain_id | 2b1xF00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 10 — Roll |
| 拓扑 Topology topology | 450 — Nuclear Transport Factor 2; Chain: A, |
| 同源超家族 H-superfamily homologous superfamily | 50 — |