2btv

ATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

PROTEIN (VP3 CORE PROTEIN)

OrganismNot specified

UniProt P56582

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 900 PROTEIN (VP7 CORE PROTEIN) × 780 (P18259) Consistent with protein count
2 Protein heterocomplex Heteromer Protein 15 PROTEIN (VP7 CORE PROTEIN) × 13 (P18259) Consistent with protein count
3 Protein heterocomplex Heteromer Protein 75 PROTEIN (VP7 CORE PROTEIN) × 65 (P18259) Consistent with protein count
4 Protein heterocomplex Heteromer Protein 90 PROTEIN (VP7 CORE PROTEIN) × 78 (P18259) Consistent with protein count
5 Protein heterocomplex Heteromer Protein 15 PROTEIN (VP7 CORE PROTEIN) × 13 (P18259) Consistent with protein count
6 Protein heterocomplex Heteromer Protein 450 PROTEIN (VP7 CORE PROTEIN) × 390 (P18259) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name VP3_BTV1S
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–901; UniProt 1–901 Author chain B; PDBConstruct 1–901; UniProt 1–901

PROTEIN (VP7 CORE PROTEIN)

OrganismNot specified

UniProt P18259

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 900 PROTEIN (VP3 CORE PROTEIN) × 120 (P56582) Consistent with protein count
2 Protein heterocomplex Heteromer Protein 15 PROTEIN (VP3 CORE PROTEIN) × 2 (P56582) Consistent with protein count
3 Protein heterocomplex Heteromer Protein 75 PROTEIN (VP3 CORE PROTEIN) × 10 (P56582) Consistent with protein count
4 Protein heterocomplex Heteromer Protein 90 PROTEIN (VP3 CORE PROTEIN) × 12 (P56582) Consistent with protein count
5 Protein heterocomplex Heteromer Protein 15 PROTEIN (VP3 CORE PROTEIN) × 2 (P56582) Consistent with protein count
6 Protein heterocomplex Heteromer Protein 450 PROTEIN (VP3 CORE PROTEIN) × 60 (P56582) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name VP7_BTV1S
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 1–349; UniProt 1–349 Author chain D; PDBConstruct 1–349; UniProt 1–349 Author chain E; PDBConstruct 1–349; UniProt 1–349 Author chain F; PDBConstruct 1–349; UniProt 1–349 Author chain G; PDBConstruct 1–349; UniProt 1–349 Author chain H; PDBConstruct 1–349; UniProt 1–349 Author chain I; PDBConstruct 1–349; UniProt 1–349 Author chain J; PDBConstruct 1–349; UniProt 1–349 Author chain P; PDBConstruct 1–349; UniProt 1–349 Author chain Q; PDBConstruct 1–349; UniProt 1–349 Author chain R; PDBConstruct 1–349; UniProt 1–349 Author chain S; PDBConstruct 1–349; UniProt 1–349 Author chain T; PDBConstruct 1–349; UniProt 1–349

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2btv
Deposition date deposition_date1998-09-05
Structure title titleATOMIC MODEL FOR BLUETONGUE VIRUS (BTV) CORE
Keywords keywordsVIRUS/VIRAL PROTEIN, Icosahedral virus, Virus; VIRUS
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2btv__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2btv__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 1012 1013 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2btv__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)290.30 Å
Total Rg290.10 Å
Atom count2943660
Residues376020
Excluded volume52516000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2btv__assembly_1__model_1 complete icosahedral assembly (900) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2btv__assembly_2__model_1 pentadecameric (15) Excluded — —
Exclusion reason: Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 2btv__assembly_3__model_1 75-meric (75) Excluded — —
Exclusion reason: Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 2btv__assembly_4__model_1 90-meric (90) Excluded — —
Exclusion reason: Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 2btv__assembly_5__model_1 pentadecameric (15) Excluded — —
Exclusion reason: Auxiliary symmetry representation; not a complete or representative biological assembly.
6 1 2btv__assembly_6__model_1 450-meric (450) Excluded — —
Exclusion reason: Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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6. Fold Classification (SCOP + CATH) 67 domains

SCOP 2.08 (28 domains)

Domain ID domain_idd2btva_
Class classe — Multi-domain proteins (alpha and beta)
Fold Fold folde.28 — Reovirus inner layer core protein p3
Superfamily Superfamily superfamilye.28.1 — Reovirus inner layer core protein p3
Family Family familye.28.1.1 — Orbivirus core
Domain ID domain_idd2btvb_
Class classe — Multi-domain proteins (alpha and beta)
Fold Fold folde.28 — Reovirus inner layer core protein p3
Superfamily Superfamily superfamilye.28.1 — Reovirus inner layer core protein p3
Family Family familye.28.1.1 — Orbivirus core
Domain ID domain_idd2btvc1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvc2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvd1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvd2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btve1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btve2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvf1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvf2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvg1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvg2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvh1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvh2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvi1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvi2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvj1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvj2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvp1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvp2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvq1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvq2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvr1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvr2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvs1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvs2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein
Domain ID domain_idd2btvt1
Class classa — All alpha proteins
Fold Fold folda.115 — A virus capsid protein alpha-helical domain
Superfamily Superfamily superfamilya.115.1 — A virus capsid protein alpha-helical domain
Family Family familya.115.1.1 — Orbivirus capsid
Domain ID domain_idd2btvt2
Class classb — All beta proteins
Fold Fold foldb.19 — Viral protein domain
Superfamily Superfamily superfamilyb.19.1 — Viral protein domain
Family Family familyb.19.1.1 — Top domain of virus capsid protein

CATH v4.4 (39 domains)

Domain ID domain_id2btvC01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvC02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvC03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvD01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvD02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvD03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvE01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvE02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvE03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvF01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvF02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvF03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvG01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvG02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvG03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvH01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvH02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvH03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvI01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvI02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvI03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvJ01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvJ02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvJ03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvP01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvP02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvP03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvQ01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvQ02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvQ03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvR01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvR02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvR03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvS01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvS02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvS03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
Domain ID domain_id2btvT01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology250 — Bluetongue Virus 10, subunit 1; domain 1
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 1
Domain ID domain_id2btvT02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily170 —
Domain ID domain_id2btvT03
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology170 — Bluetongue Virus 10, subunit 1; domain 3
Homologous superfamily homologous superfamily10 — Bluetongue Virus 10, subunit 1, domain 3
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7. Citations (1)