2j3v

Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

C2 TOXIN COMPONENT I

CLOSTRIDIUM BOTULINUM

UniProt O69275

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 GLYCEROL × 15 SULFATE ION × 14 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name O69275_CLOBO
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–431; UniProt 1–431

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2j3v
Deposition date deposition_date2006-08-23
Structure title titleCrystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 3.0
Keywords keywordsADP-RIBOSYLTRANSFERASE, TOXIN, CLOSTRIDIUM BOTULINUM; TOXIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2j3v__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2j3v__assembly_1__model_1 | I(q)

10-2 10-1 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2j3v__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)25.17 Å
Rg (electron density)24.01 Å
Total Rg24.93 Å
Atom count3634
Residues430
Excluded volume64600 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2j3v__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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6. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd2j3va1
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.166 — ADP-ribosylation
Superfamily Superfamily superfamilyd.166.1 — ADP-ribosylation
Family Family familyd.166.1.0 — automated matches
Domain ID domain_idd2j3va2
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.166 — ADP-ribosylation
Superfamily Superfamily superfamilyd.166.1 — ADP-ribosylation
Family Family familyd.166.1.0 — automated matches

CATH v4.4 (2 domains)

Domain ID domain_id2j3vA01
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology176 — Toxin ADP-ribosyltransferase; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Toxin ADP-ribosyltransferase; Chain A, domain 1
Domain ID domain_id2j3vA02
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology176 — Toxin ADP-ribosyltransferase; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Toxin ADP-ribosyltransferase; Chain A, domain 1
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7. Citations (1)