APIS MELLIFERA
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein heterocomplex | Heteromer | Protein 3 | FAB × 1 FAB × 1 water × 3 | Consistent with protein count |
| UniProt name | HUGA_APIME |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–350； UniProt 33–382 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 2j88 |
| Deposition date deposition_date | 2006-10-23 |
| Structure title title | Hyaluronidase in complex with a monoclonal IgG Fab fragment |
| Keywords keywords | ;GLYCOPROTEIN, GLYCOSIDASE FAMILY 56, ZYMOGEN, ALLERGEN, 7- STRANDED (BETA/ALPHA) TIM BARREL, HYDROLASE, GLYCOSIDASE, IMMUNOGLOBULIN DOMAIN ;; HYDROLASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 36.40 Å |
| Rg (electron density) | 36.55 Å |
| Total Rg | 36.81 Å |
| Atom count | 5024 |
| Residues | 655 |
| Excluded volume | 88633 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d2j88a_ |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.1 — TIM beta/alpha-barrel |
| Superfamily Superfamily superfamily | c.1.8 — (Trans)glycosidases |
| Family Family family | c.1.8.9 — Bee venom hyaluronidase |
| Domain ID domain_id | d2j88h1 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.1 — Immunoglobulin-like beta-sandwich |
| Superfamily Superfamily superfamily | b.1.1 — Immunoglobulin |
| Family Family family | b.1.1.2 — C1 set domains (antibody constant domain-like) |
| Domain ID domain_id | d2j88l1 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.1 — Immunoglobulin-like beta-sandwich |
| Superfamily Superfamily superfamily | b.1.1 — Immunoglobulin |
| Family Family family | b.1.1.1 — V set domains (antibody variable domain-like) |
| Domain ID domain_id | d2j88l2 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.1 — Immunoglobulin-like beta-sandwich |
| Superfamily Superfamily superfamily | b.1.1 — Immunoglobulin |
| Family Family family | b.1.1.2 — C1 set domains (antibody constant domain-like) |
| Domain ID domain_id | 2j88A00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 20 — Alpha-Beta Barrel |
| Topology topology | 20 — TIM Barrel |
| Homologous superfamily homologous superfamily | 70 — Aldolase class I |
| Domain ID domain_id | 2j88H01 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 60 — Sandwich |
| Topology topology | 40 — Immunoglobulin-like |
| Homologous superfamily homologous superfamily | 10 — Immunoglobulins |
| Domain ID domain_id | 2j88H02 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 60 — Sandwich |
| Topology topology | 40 — Immunoglobulin-like |
| Homologous superfamily homologous superfamily | 10 — Immunoglobulins |
| Domain ID domain_id | 2j88L01 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 60 — Sandwich |
| Topology topology | 40 — Immunoglobulin-like |
| Homologous superfamily homologous superfamily | 10 — Immunoglobulins |
| Domain ID domain_id | 2j88L02 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 60 — Sandwich |
| Topology topology | 40 — Immunoglobulin-like |
| Homologous superfamily homologous superfamily | 10 — Immunoglobulins |