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;A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand ;

Method: X-RAY DIFFRACTION

SAXS 散射曲线 SAXS Profile

暂无 SAXS 图

P(r) 距离分布 P(r) Distribution

暂无 P(r) 图
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1. 结构基本信息 1. Structure Basics

条目编号 entry_id2jiq
沉积日期 deposition_date2007-06-28
结构标题 title;A New Catalytic Mechanism of Periplasmic Nitrate Reductase from Desulfovibrio desulfuricans ATCC 27774 from Crystallographic and EPR Data and based on detailed analysis of the sixth ligand ;
关键词 keywords;NITRATE ASSIMILATION, NITROGENOUS ACCEPTOR, IRON, TRANSPORT, MOLYBDENUM, PERIPLASMIC, DISULFIDE BOND, ELECTRON TRANSPORT, IRON-SULFUR, IRON- SULFUR, METAL-BINDING, DISSIMILATORY NITRATE REDUCTASE, MOLYBDOPTERIN COFACTOR, SULFIDO LIGAND, 4FE-4S CLUSTER, OXIDOREDUCTASE, ELECTRON PARAMAGNETIC RESONANCE ;; OXIDOREDUCTASE
实验方法 methodX-RAY DIFFRACTION
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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)

该条目暂无 SAXS 数据。

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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)

该条目暂无 P(r) 分析数据。

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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合体信息 (8)

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6. 折叠分类 (SCOP + CATH) 6 domains

SCOP 2.08 (2 domains)

结构域编号 domain_idd2jiqa1
类 Class classb — All beta proteins
折叠类型 Fold foldb.52 — Double psi beta-barrel
超家族 Superfamily superfamilyb.52.2 — ADC-like
家族 Family familyb.52.2.0 — automated matches
结构域编号 domain_idd2jiqa2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.81 — Formate dehydrogenase/DMSO reductase, domains 1-3
超家族 Superfamily superfamilyc.81.1 — Formate dehydrogenase/DMSO reductase, domains 1-3
家族 Family familyc.81.1.1 — Formate dehydrogenase/DMSO reductase, domains 1-3

CATH v4.4 (4 domains)

结构域编号 domain_id2jiqA01
类 Class class2 — Mainly Beta
架构 Architecture architecture20 — Single Sheet
拓扑 Topology topology25 — N-terminal domain of TfIIb
同源超家族 H-superfamily homologous superfamily90 — ADC-like domains
结构域编号 domain_id2jiqA02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily740 —
结构域编号 domain_id2jiqA03
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology228 — Dimethylsulfoxide Reductase; domain 2
同源超家族 H-superfamily homologous superfamily10 — Dimethylsulfoxide Reductase, domain 2
结构域编号 domain_id2jiqA04
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology40 — Barwin-like endoglucanases
同源超家族 H-superfamily homologous superfamily20 —
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7. 引用文献 (2)

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8. 文件与曲线 (0)