← Back to search
2pgv

GTB C209A

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Glycoprotein-fucosylgalactoside alpha-galactosyltransferase

Homo sapiens

UniProt P16442

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 2 MERCURY (II) ION × 6 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1lz0 1lz7 1wsz 1wt0 1xz6 1zhj 1zi1 1ziz 1zjo 1zjp 2a8w 2rit

47 assemblies; showing the first 12

Homodimer
1lz0 1lz7 1wsz 1wt0 1xz6 1zhj 1zi1 1ziz 1zjo 1zjp 2a8w 2pgv

78 assemblies; showing the first 12

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1lzi 1lzi 1r7t 1r7t 1r7u 1r7u 1r7v 1r7v 1r7x 1r7x 1r7y 1r7y

49 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name BGAT_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 2–292； UniProt 64–354

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id2pgv
Deposition date deposition_date2007-04-10
Structure title titleGTB C209A
Keywords keywordsGlycosyltransferase, ABO(H), blood group, H-antigen, GTB, Rossmann fold, C209A, TRANSFERASE; TRANSFERASE
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2pgv__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2pgv__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2pgv__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）25.84 Å
Rg (electron density)24.98 Å
Total Rg25.71 Å
Atom count4432
Residues542
Excluded volume79651 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2pgv__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (3)

▼

6. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd2pgva_
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.68 — Nucleotide-diphospho-sugar transferases
Superfamily Superfamily superfamilyc.68.1 — Nucleotide-diphospho-sugar transferases
Family Family familyc.68.1.9 — alpha-1,3-galactosyltransferase-like

CATH v4.4 (1 domains)

Domain ID domain_id2pgvA00
Class class3 — Alpha Beta
Architecture architecture90 — Alpha-Beta Complex
Topology topology550 — Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
Homologous superfamily homologous superfamily10 — Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
▶

7. Citations (1)