2uum

Crystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.

Method: X-RAY DIFFRACTION

1. 蛋白身份与相关结构 Protein Identity & Related Structures

C-PHYCOCYANIN ALPHA CHAIN

物种未注明

UniProt P72509

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 C-PHYCOCYANIN BETA CHAIN × 6 (P72508) PHYCOCYANOBILIN × 18 water × 8 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 12 C-PHYCOCYANIN BETA CHAIN × 5 (P72508) C-PHYCOCYANIN BETA CHAIN × 1 (P72508) PHYCOCYANOBILIN × 18 water × 9 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PHCA_SPIPL
Isoform
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–162; UniProt 1–162 作者链 C; PDB构建体 1–162; UniProt 1–162 作者链 E; PDB构建体 1–162; UniProt 1–162 作者链 G; PDB构建体 1–162; UniProt 1–162 作者链 I; PDB构建体 1–162; UniProt 1–162 作者链 K; PDB构建体 1–162; UniProt 1–162 作者链 M; PDB构建体 1–162; UniProt 1–162 作者链 O; PDB构建体 1–162; UniProt 1–162 作者链 Q; PDB构建体 1–162; UniProt 1–162 作者链 S; PDB构建体 1–162; UniProt 1–162 作者链 U; PDB构建体 1–162; UniProt 1–162 作者链 W; PDB构建体 1–162; UniProt 1–162

C-PHYCOCYANIN BETA CHAIN

物种未注明

UniProt P72508

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 C-PHYCOCYANIN ALPHA CHAIN × 6 (P72509) PHYCOCYANOBILIN × 18 water × 8 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 12 C-PHYCOCYANIN ALPHA CHAIN × 6 (P72509) PHYCOCYANOBILIN × 18 water × 9 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 PHCB_SPIPL
Isoform
PDB实体 2, 3
链与序列区间 作者链 B; PDB构建体 1–172; UniProt 1–172 作者链 D; PDB构建体 1–172; UniProt 1–172 作者链 F; PDB构建体 1–172; UniProt 1–172 作者链 H; PDB构建体 1–172; UniProt 1–172 作者链 J; PDB构建体 1–172; UniProt 1–172 作者链 L; PDB构建体 1–172; UniProt 1–172 作者链 N; PDB构建体 1–172; UniProt 1–172 作者链 P; PDB构建体 1–172; UniProt 1–172 作者链 R; PDB构建体 1–172; UniProt 1–172 作者链 T; PDB构建体 1–172; UniProt 1–172 作者链 V; PDB构建体 1–172; UniProt 1–172 作者链 X; PDB构建体 1–172; UniProt 1–172

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

2. 结构基本信息 2. Structure Basics

条目编号 entry_id2uum
沉积日期 deposition_date2007-03-04
结构标题 titleCrystal structure of C-phycocyanin from Phormidium, Lyngbya spp. (Marine) and Spirulina sp. (Fresh water) shows two different ways of energy transfer between two hexamers.
关键词 keywords;PHOTOSYNTHESIS, ELECTRON TRANSPORT, SPIRULINA SP, C-PHYCOCYANIN, PHYCOBILISOME, MARINE, TRANSPORT, LYNGBYA SP, PHORMIDIUM, CHROMOPHORE, FRESH WATER, METHYLATION, BILE PIGMENT ;; ELECTRON TRANSPORT
实验方法 methodX-RAY DIFFRACTION

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

2uum__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

2uum__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

2uum__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)41.44 Å
Rg(电子密度)40.67 Å
总 Rg41.07 Å
原子数15720
残基数2004
排除体积279900 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 2uum__assembly_1__model_1 dodecameric (12) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 2uum__assembly_2__model_1 dodecameric (12) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载

4. 晶体学与实验 4. Crystallography & Experiment

5. 实体与聚合物信息 Entities & Polymers (5)

6. 折叠分类 (SCOP + CATH) 48 domains

SCOP 2.08 (24 domains)

结构域编号 domain_idd2uuma_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumb_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumc_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumd_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uume_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumf_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumg_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumh_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumi_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumj_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumk_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uuml_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumm_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumn_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumo_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uump_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumq_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumr_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uums_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumt_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumu_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumv_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumw_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins
结构域编号 domain_idd2uumx_
类 Class classa — All alpha proteins
折叠类型 Fold folda.1 — Globin-like
超家族 Superfamily superfamilya.1.1 — Globin-like
家族 Family familya.1.1.3 — Phycocyanin-like phycobilisome proteins

CATH v4.4 (24 domains)

结构域编号 domain_id2uumA00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumB00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumC00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumD00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumE00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumF00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumG00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumH00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumI00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumJ00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumK00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumL00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumM00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumN00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumO00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumP00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumQ00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumR00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumS00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumT00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumU00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumV00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumW00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins
结构域编号 domain_id2uumX00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology490 — Globin-like
同源超家族 H-superfamily homologous superfamily20 — Phycocyanins

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