CLOSTRIDIUM NOVYI
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | water × 1 | Consistent with protein count |
| UniProt name | Q46149_CLONO |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–551； UniProt 1–551 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 2vk9 |
| Deposition date deposition_date | 2007-12-18 |
| Structure title title | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF ALPHA-TOXIN FROM CLOSTRIDIUM NOVYI |
| Keywords keywords | TOXIN, GLYCOSYLTRANSFERASE; TOXIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 27.86 Å |
| Rg (electron density) | 26.97 Å |
| Total Rg | 27.80 Å |
| Atom count | 4415 |
| Residues | 540 |
| Excluded volume | 79007 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d2vk9a1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.68 — Nucleotide-diphospho-sugar transferases |
| Superfamily Superfamily superfamily | c.68.1 — Nucleotide-diphospho-sugar transferases |
| Family Family family | c.68.1.22 — Glycosylating toxin catalytic domain-like |
| Domain ID domain_id | 2vk9A01 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 20 — Up-down Bundle |
| Topology topology | 58 — Methane Monooxygenase Hydroxylase; Chain G, domain 1 |
| Homologous superfamily homologous superfamily | 1190 — |
| Domain ID domain_id | 2vk9A03 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 3730 — ProC C-terminal domain-like fold |
| Homologous superfamily homologous superfamily | 30 — |
| Domain ID domain_id | 2vk9A04 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 274 — Enzyme I; Chain A, domain 2 |
| Homologous superfamily homologous superfamily | 80 — |