2vv5

The open structure of MscS

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL

ESCHERICHIA COLI

UniProt P0C0S2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 7 无其他共同聚合物 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 MSCS_ECO57
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–286; UniProt 1–286 作者链 B; PDB构建体 1–286; UniProt 1–286 作者链 C; PDB构建体 1–286; UniProt 1–286 作者链 D; PDB构建体 1–286; UniProt 1–286 作者链 E; PDB构建体 1–286; UniProt 1–286 作者链 F; PDB构建体 1–286; UniProt 1–286 作者链 G; PDB构建体 1–286; UniProt 1–286

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id2vv5
沉积日期 deposition_date2008-06-03
结构标题 titleThe open structure of MscS
关键词 keywords;ION TRANSPORT, TRANSMEMBRANE, INNER MEMBRANE, MEMBRANE STRUCTURE, MEMBRANE PROTEIN, MEMBRANE, TRANSPORT, OPEN CHANNEL, IONIC CHANNEL ;; MEMBRANE PROTEIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

2vv5__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

2vv5__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

2vv5__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)41.03 Å
Rg(电子密度)40.49 Å
总 Rg41.02 Å
原子数13692
残基数1799
排除体积248230 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 2vv5__assembly_1__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (1)

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6. 折叠分类 (SCOP + CATH) 42 domains

SCOP 2.08 (21 domains)

结构域编号 domain_idd2vv5a1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5a2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5a3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5b1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5b2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5b3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5c1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5c2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5c3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5d1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5d2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5d3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5e1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5e2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5e3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5f1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5f2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5f3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
结构域编号 domain_idd2vv5g1
类 Class classb — All beta proteins
折叠类型 Fold foldb.38 — Sm-like fold
超家族 Superfamily superfamilyb.38.1 — Sm-like ribonucleoproteins
家族 Family familyb.38.1.3 — Mechanosensitive channel protein MscS (YggB), middle domain
结构域编号 domain_idd2vv5g2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.58 — Ferredoxin-like
超家族 Superfamily superfamilyd.58.43 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
家族 Family familyd.58.43.1 — Mechanosensitive channel protein MscS (YggB), C-terminal domain
结构域编号 domain_idd2vv5g3
类 Class classf — Membrane and cell surface proteins and peptides
折叠类型 Fold foldf.34 — Mechanosensitive channel protein MscS (YggB), transmembrane region
超家族 Superfamily superfamilyf.34.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region
家族 Family familyf.34.1.1 — Mechanosensitive channel protein MscS (YggB), transmembrane region

CATH v4.4 (21 domains)

结构域编号 domain_id2vv5A01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5A02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5A03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5B01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5B02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5B03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5C01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5C02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5C03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5D01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5D02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5D03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5E01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5E02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5E03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5F01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5F02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5F03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
结构域编号 domain_id2vv5G01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily1260 —
结构域编号 domain_id2vv5G02
类 Class class2 — Mainly Beta
架构 Architecture architecture30 — Roll
拓扑 Topology topology30 — SH3 type barrels.
同源超家族 H-superfamily homologous superfamily60 —
结构域编号 domain_id2vv5G03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily100 —
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7. 引用文献 (1)