2w9l

CANINE ADENOVIRUS TYPE 2 FIBRE HEAD IN COMPLEX WITH CAR DOMAIN D1 AND SIALIC ACID

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR

HOMO SAPIENS

UniProt P78310

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 6 其他Polymer 3 FIBRE PROTEIN × 3 (Q65914) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 3 water × 6 Consistent with protein count
2 Other combination Heteromer Protein 6 其他Polymer 3 FIBRE PROTEIN × 3 (Q65914) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 2 N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-gulopyranose × 1 water × 6 Consistent with protein count
3 Other combination Heteromer Protein 6 其他Polymer 3 FIBRE PROTEIN × 3 (Q65914) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 3 water × 6 Consistent with protein count
4 Other combination Heteromer Protein 6 其他Polymer 3 FIBRE PROTEIN × 3 (Q65914) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 2 N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-gulopyranose × 1 water × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CXAR_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–124; UniProt 16–139 Author chain B; PDBConstruct 1–124; UniProt 16–139 Author chain G; PDBConstruct 1–124; UniProt 16–139 Author chain J; PDBConstruct 1–124; UniProt 16–139 Author chain K; PDBConstruct 1–124; UniProt 16–139 Author chain O; PDBConstruct 1–124; UniProt 16–139 Author chain P; PDBConstruct 1–124; UniProt 16–139 Author chain T; PDBConstruct 1–124; UniProt 16–139 Author chain V; PDBConstruct 1–124; UniProt 16–139 Author chain X; PDBConstruct 1–124; UniProt 16–139 Author chain Y; PDBConstruct 1–124; UniProt 16–139 Author chain Z; PDBConstruct 1–124; UniProt 16–139

FIBRE PROTEIN

CANINE ADENOVIRUS 2

UniProt Q65914

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 6 其他Polymer 3 COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR × 3 (P78310) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 3 water × 6 Consistent with protein count
2 Other combination Heteromer Protein 6 其他Polymer 3 COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR × 3 (P78310) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 2 N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-gulopyranose × 1 water × 6 Consistent with protein count
3 Other combination Heteromer Protein 6 其他Polymer 3 COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR × 3 (P78310) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 3 water × 6 Consistent with protein count
4 Other combination Heteromer Protein 6 其他Polymer 3 COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR × 3 (P78310) N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose × 2 N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-gulopyranose × 1 water × 6 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FIBP_ADECT
Isoform —
PDB entities 2
Chains and sequence ranges Author chain C; PDBConstruct 13–197; UniProt 358–542 Author chain D; PDBConstruct 13–197; UniProt 358–542 Author chain E; PDBConstruct 13–197; UniProt 358–542 Author chain F; PDBConstruct 13–197; UniProt 358–542 Author chain H; PDBConstruct 13–197; UniProt 358–542 Author chain I; PDBConstruct 13–197; UniProt 358–542 Author chain L; PDBConstruct 13–197; UniProt 358–542 Author chain M; PDBConstruct 13–197; UniProt 358–542 Author chain N; PDBConstruct 13–197; UniProt 358–542 Author chain Q; PDBConstruct 13–197; UniProt 358–542 Author chain R; PDBConstruct 13–197; UniProt 358–542 Author chain S; PDBConstruct 13–197; UniProt 358–542

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2w9l
Deposition date deposition_date2009-01-26
Structure title titleCANINE ADENOVIRUS TYPE 2 FIBRE HEAD IN COMPLEX WITH CAR DOMAIN D1 AND SIALIC ACID
Keywords keywords;IMMUNOGLOBULIN DOMAIN, CAR, KNOB, FIBER, FIBRE, CAV-2, CANINE, COMPLEX, ERYTHROCYTE, SIALIC ACID, GLYCOPROTEIN, FIBER HEAD, ADENOVIRUS, FIBRE HEAD, LIPOPROTEIN, FIBER PROTEIN, CELL JUNCTION, CELL ADHESION, RED BLOOD CELL, COXSACKIEVIRUS, PHOSPHOPROTEIN, MEMBRANE, SECRETED, RECEPTOR, PALMITATE, DOMAIN D1, HOST-VIRUS INTERACTION, VIRUS-RECEPTOR COMPLEX, TRANSMEMBRANE, CELL MEMBRANE, SIALYL-LACTOSE, TIGHT JUNCTION, PHOSPHORYLATION, HEMAGGLUTINATION ;; RECEPTOR
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2w9l__assembly_3__model_1

Assembly 3 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2w9l__assembly_3__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2w9l__assembly_3__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)31.61 Å
Rg (electron density)31.15 Å
Total Rg31.71 Å
Atom count7160
Residues911
Excluded volume127850 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2w9l__assembly_1__model_1 hexameric (6) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2w9l__assembly_2__model_1 hexameric (6) Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 2w9l__assembly_3__model_1 hexameric (6) Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 2w9l__assembly_4__model_1 hexameric (6) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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6. Fold Classification (SCOP + CATH) 48 domains

SCOP 2.08 (24 domains)

Domain ID domain_idd2w9la_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lb_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lc_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9ld_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9le_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lf_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lg_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lh_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9li_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lj_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lk_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9ll_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lm_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9ln_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lo_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lp_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lq_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lr_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9ls_
Class classb — All beta proteins
Fold Fold foldb.21 — Virus attachment protein globular domain
Superfamily Superfamily superfamilyb.21.1 — Virus attachment protein globular domain
Family Family familyb.21.1.1 — Adenovirus fiber protein 'knob' domain
Domain ID domain_idd2w9lt_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lv_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lx_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9ly_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)
Domain ID domain_idd2w9lz_
Class classb — All beta proteins
Fold Fold foldb.1 — Immunoglobulin-like beta-sandwich
Superfamily Superfamily superfamilyb.1.1 — Immunoglobulin
Family Family familyb.1.1.1 — V set domains (antibody variable domain-like)

CATH v4.4 (24 domains)

Domain ID domain_id2w9lA00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lB00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lC00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lD00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lE00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lF00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lG00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lH00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lI00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lJ00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lK00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lL00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lM00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lN00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lO00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lP00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lQ00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lR00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lS00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology90 — Adenovirus Type 5 Fiber Protein (Receptor Binding Domain)
Homologous superfamily homologous superfamily10 — Adenovirus pIV-related, attachment domain
Domain ID domain_id2w9lT00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lV00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lX00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lY00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id2w9lZ00
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
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7. Citations (1)