2xy9

Human Angiotensin converting enzyme in complex with phosphinic tripeptide

Method: X-RAY DIFFRACTION Dmax: 78.4 Å Quality: REASONABLE

1. Protein Identity and Related Structures Protein Identity & Related Structures

ANGIOTENSIN-CONVERTING ENZYME

HOMO SAPIENS

UniProt P12821

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Other combination Monomer Protein × 1 其他Polymer 1 PDB declaration: monomeric(1) Consistent with protein copy count Chain A; UniProt 71–654 Fragment:RESIDUES 71-654 ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; × 1 ACT ACETATE ION × 1 CL CHLORIDE ION × 2 ZN ZINC ION × 1 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 1 3ES [(2S)-2-({3-[HYDROXYL(2-PHENYL-(1R)-1-{[(BENZYLOXY)[(2S)-2-({3-[HYDROXYL(2-PHENYL-(1R)-1-CARBONYL]-AMINO}ETHYL)PHOSPHINYL]-2-[(3-PHENYLISOXAZOL-5-YL)METHYL]-1-OXO-PROPYL}AMINO)-3-(4-HYDROXY-PHENYL) × 2 X-RAY DIFFRACTION X-ray crystallization conditions:pH 4.7;13.5% PEG4000,50MM SODIUM ACETATE, PH 4.7 AND 0.01MM ZNSO4 Resolution 1.97 Å R-free 0.232

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

89 other PDB entries and 150 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ACE_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–584; UniProt 71–654

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 2xy9

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 2xy9
Download Download

2. Structure Basics 2. Structure Basics

Entry ID entry_id2xy9
Deposition date deposition_date2010-11-16
Structure title titleHuman Angiotensin converting enzyme in complex with phosphinic tripeptide
Keywords keywordsHYDROLASE, ZINC METALLOPROTEASE, METALLOPEPTIDASE; HYDROLASE
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier24.89
Radius of gyration Rg (electron density) rg_electron23.61
Forward intensity I(0) i077561200.00
Molecular weight molecular_weight69850.0 kDa
Excluded volume excluded_volume87490 ų
Envelope volume envelope_volume100100 ų
Hydration-shell volume shell_volume33671 ų
Envelope diameter envelope_diameter82.5
Shell Rg shell_rg32.38
Envelope Rg envelope_rg23.91
Shape Rg shape_rg23.58
Total Rg total_rg24.61
Total atoms total_atoms4925
Residues n_residues581
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax78.4
Rg (real space) rg_real24.72
Rg uncertainty (real space) rg_real_error0.36
I(0) (real space) i0_real7.7560e+07
I(0) uncertainty (real space) i0_real_error1.0660e+06
Rg (reciprocal space) rg_reciprocal24.76
I(0) (reciprocal space) i0_reciprocal77560000.0000
Solution quality estimate total_estimate0.6703
Solution quality rating solution_quality REASONABLE a REASONABLE solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary32.4
Skewness Skewness skewness0.188
Kurtosis Kurtosis kurtosis-0.358
Angular range angular_range— – 0.3200 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha26580000.0000
Real-space data points n_real_points64
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.871; Stabil: 1.000; Sysdev: 0.036; Positv: 1.000; Valcen: 0.993; Smooth: 0.996

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (9)

7. Fold Classification (SCOP + CATH) 2 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd2xy9a1
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.92 — Zincin-like
Superfamily Superfamily superfamilyd.92.1 — Metalloproteases ('zincins'), catalytic domain
Family Family familyd.92.1.5 — Neurolysin-like
Domain ID domain_idd2xy9a2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags

8. Citations (1)

9. Files and Curves (10)