Agrobacterium tumefaciens
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 2 | COBALT (II) ION × 4 water × 2 | Consistent with protein count |
| UniProt name | Q93LD7_9RHIZ |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 4–329； UniProt 35–360 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3a3x |
| Deposition date deposition_date | 2009-06-23 |
| Structure title title | Structure of OpdA mutant (G60A/A80V/R118Q/K185R/Q206P/D208G/I260T/G273S) |
| Keywords keywords | phosphotriesterase, OPDA, metalloenzyme, hydrolase; HYDROLASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 27.66 Å |
| Rg (electron density) | 27.12 Å |
| Total Rg | 27.80 Å |
| Atom count | 5022 |
| Residues | 656 |
| Excluded volume | 89436 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d3a3xa1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.1 — TIM beta/alpha-barrel |
| Superfamily Superfamily superfamily | c.1.9 — Metallo-dependent hydrolases |
| Family Family family | c.1.9.3 — Phosphotriesterase-like |
| Domain ID domain_id | d3a3xa2 |
| Class class | l — Artifacts |
| Fold Fold fold | l.1 — Tags |
| Superfamily Superfamily superfamily | l.1.1 — Tags |
| Family Family family | l.1.1.1 — Tags |
| Domain ID domain_id | 3a3xA00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 20 — Alpha-Beta Barrel |
| Topology topology | 20 — TIM Barrel |
| Homologous superfamily homologous superfamily | 140 — Metal-dependent hydrolases |