3cf1

Structure of P97/vcp in complex with ADP/ADP.alfx

Method: X-RAY DIFFRACTION
▼

1. 蛋白身份与相关结构 Protein Identity & Related Structures

Transitional endoplasmic reticulum ATPase

Mus musculus

UniProt Q01853

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 6 ADENOSINE-5'-DIPHOSPHATE × 12 ALUMINUM FLUORIDE × 6 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TERA_MOUSE
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–806; UniProt 1–806 作者链 B; PDB构建体 1–806; UniProt 1–806 作者链 C; PDB构建体 1–806; UniProt 1–806

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

▼

2. 结构基本信息 2. Structure Basics

条目编号 entry_id3cf1
沉积日期 deposition_date2008-03-01
结构标题 titleStructure of P97/vcp in complex with ADP/ADP.alfx
关键词 keywordsAAA, CDC48, ERAD, ATPASE, TRANSPORT PROTEIN; TRANSPORT PROTEIN
实验方法 methodX-RAY DIFFRACTION
▼

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

3cf1__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

3cf1__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

3cf1__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)53.02 Å
Rg(电子密度)52.77 Å
总 Rg52.98 Å
原子数34250
残基数4328
排除体积610020 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 3cf1__assembly_1__model_1 hexameric (6) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
▶

4. 晶体学与实验 4. Crystallography & Experiment

▶

5. 实体与聚合物信息 Entities & Polymers (3)

▼

6. 折叠分类 (SCOP + CATH) 12 domains

SCOP 2.08 (12 domains)

结构域编号 domain_idd3cf1a1
类 Class classb — All beta proteins
折叠类型 Fold foldb.52 — Double psi beta-barrel
超家族 Superfamily superfamilyb.52.2 — ADC-like
家族 Family familyb.52.2.3 — Cdc48 N-terminal domain-like
结构域编号 domain_idd3cf1a2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1a3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1a4
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.31 — Cdc48 domain 2-like
超家族 Superfamily superfamilyd.31.1 — Cdc48 domain 2-like
家族 Family familyd.31.1.1 — Cdc48 domain 2-like
结构域编号 domain_idd3cf1b1
类 Class classb — All beta proteins
折叠类型 Fold foldb.52 — Double psi beta-barrel
超家族 Superfamily superfamilyb.52.2 — ADC-like
家族 Family familyb.52.2.3 — Cdc48 N-terminal domain-like
结构域编号 domain_idd3cf1b2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1b3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1b4
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.31 — Cdc48 domain 2-like
超家族 Superfamily superfamilyd.31.1 — Cdc48 domain 2-like
家族 Family familyd.31.1.1 — Cdc48 domain 2-like
结构域编号 domain_idd3cf1c1
类 Class classb — All beta proteins
折叠类型 Fold foldb.52 — Double psi beta-barrel
超家族 Superfamily superfamilyb.52.2 — ADC-like
家族 Family familyb.52.2.3 — Cdc48 N-terminal domain-like
结构域编号 domain_idd3cf1c2
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1c3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.20 — Extended AAA-ATPase domain
结构域编号 domain_idd3cf1c4
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.31 — Cdc48 domain 2-like
超家族 Superfamily superfamilyd.31.1 — Cdc48 domain 2-like
家族 Family familyd.31.1.1 — Cdc48 domain 2-like
▶

7. 引用文献 (3)