Vibrio cholerae
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | 1H-benzo[de]isoquinoline-1,3(2H)-dione × 1 water × 1 | Consistent with protein count |
| UniProt name | Q5EK40_VIBCH |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 24–230； UniProt 459–665 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3ess |
| Deposition date deposition_date | 2008-10-06 |
| Structure title title | Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with the 1,8-Naphthalimide inhibitor |
| Keywords keywords | ADP-ribosyl transferase, Domain III (C-terminal catalytic domain), alpha-beta complex, toxin, TRANSFERASE; TRANSFERASE,TOXIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 18.66 Å |
| Rg (electron density) | 17.41 Å |
| Total Rg | 18.48 Å |
| Atom count | 1570 |
| Residues | 199 |
| Excluded volume | 27590 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d3essa1 |
| Class class | d — Alpha and beta proteins (a+b) |
| Fold Fold fold | d.166 — ADP-ribosylation |
| Superfamily Superfamily superfamily | d.166.1 — ADP-ribosylation |
| Family Family family | d.166.1.0 — automated matches |
| Domain ID domain_id | d3essa2 |
| Class class | l — Artifacts |
| Fold Fold fold | l.1 — Tags |
| Superfamily Superfamily superfamily | l.1.1 — Tags |
| Family Family family | l.1.1.1 — Tags |
| Domain ID domain_id | 3essA00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 90 — Alpha-Beta Complex |
| Topology topology | 175 — Diphtheria Toxin; domain 1 |
| Homologous superfamily homologous superfamily | 10 — Diphtheria Toxin, domain 1 |