3jqh

Structure of the neck region of the glycan-binding receptor DC-SIGNR

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

C-type lectin domain family 4 member M

Homo sapiens

UniProt Q9H2X3

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 24 water × 24 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CLC4M_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–164; UniProt 101–264

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id3jqh
Deposition date deposition_date2009-09-06
Structure title titleStructure of the neck region of the glycan-binding receptor DC-SIGNR
Keywords keywords;DC-SIGNR, four-helix bundle, oligomerization domain, Alternative splicing, Calcium, Cell membrane, Disulfide bond, Endocytosis, Glycoprotein, Host-virus interaction, Immune response, Lectin, Mannose-binding, Membrane, Metal-binding, Polymorphism, Receptor, Secreted, Signal-anchor, Transmembrane, SUGAR BINDING PROTEIN ;; SUGAR BINDING PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

3jqh__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

3jqh__assembly_1__model_1 | I(q)

10-2 10-1 104 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

3jqh__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)60.69 Å
Rg (electron density)64.02 Å
Total Rg62.78 Å
Atom count4440
Residues552
Excluded volume80779 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 3jqh__assembly_1__model_1 24-meric (24) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)