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5lvc

Aichi virus 1: empty particle

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

VP1

Aichi virus

UniProt Q91QP4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 180 VP3 × 60 （O91464） Consistent with protein count
2 Protein heterocomplex Heteromer Protein 3 VP3 × 1 （O91464） Consistent with protein count
3 Protein heterocomplex Heteromer Protein 15 VP3 × 5 （O91464） Consistent with protein count
4 Protein heterocomplex Heteromer Protein 18 VP3 × 6 （O91464） Consistent with protein count
5 Protein heterocomplex Heteromer Protein 3 VP3 × 1 （O91464） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
5aoo 5aoo 5aoo 5aoo 5aoo

5 assemblies

Heteromeric or nucleic-acid complex
5lvc 5lvc 5lvc 5lvc 5lvc

5 assemblies

View Construct and Data Evidence
UniProt name Q91QP4_AIV
Isoform —
PDB entities 1, 2
Chains and sequence ranges Author chain a； PDBConstruct 1–253； UniProt 764–1016 Author chain b； PDBConstruct 1–370； UniProt 171–540

VP3

OrganismNot specified

UniProt O91464

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 180 VP1 × 60 （Q91QP4） VP0 × 60 （Q91QP4） Consistent with protein count
2 Protein heterocomplex Heteromer Protein 3 VP1 × 1 （Q91QP4） VP0 × 1 （Q91QP4） Consistent with protein count
3 Protein heterocomplex Heteromer Protein 15 VP1 × 5 （Q91QP4） VP0 × 5 （Q91QP4） Consistent with protein count
4 Protein heterocomplex Heteromer Protein 18 VP1 × 6 （Q91QP4） VP0 × 6 （Q91QP4） Consistent with protein count
5 Protein heterocomplex Heteromer Protein 3 VP1 × 1 （Q91QP4） VP0 × 1 （Q91QP4） Consistent with protein count

Other States of the Same Protein in the Database

Monomer
7zv1 7zv1 7zv1 7zv6 7zv6 7zv6

6 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
5lvc 5lvc 5lvc 5lvc 5lvc 5lz3

6 assemblies

View Construct and Data Evidence
UniProt name O91464_AIV
Isoform —
PDB entities 3
Chains and sequence ranges Author chain c； PDBConstruct 1–223； UniProt 542–764

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5lvc
Deposition date deposition_date2016-09-13
Structure title titleAichi virus 1: empty particle
Keywords keywordspicornavirus, picornaviridae, Aichi virus 1, empty particle, kobuvirus, 50 genome, release, human, pathogen, virus, RNA; VIRUS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5lvc__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5lvc__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5lvc__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)135.00 Å
Total Rg135.20 Å
Atom count327840
Residues43020
Excluded volume5825000 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5lvc__assembly_1__model_1 180-meric （180） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 5lvc__assembly_2__model_1 trimeric （3） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 5lvc__assembly_3__model_1 pentadecameric （15） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 5lvc__assembly_4__model_1 octadecameric （18） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 5lvc__assembly_5__model_1 trimeric （3） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)