Bifidobacterium adolescentis
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | GLYCEROL × 1 water × 1 | Consistent with protein count |
| UniProt name | Q84HQ2_BIFAD |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain B； PDBConstruct 1–504； UniProt 1–504 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 5mb2 |
| Deposition date deposition_date | 2016-11-07 |
| Structure title title | Structure of sucrose phosphorylase from Bifidobacterium adolescentis bound to nigerose |
| Keywords keywords | sucrose phosphorylase, resveratrol, enzyme design, transferase; TRANSFERASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 24.09 Å |
| Rg (electron density) | 22.88 Å |
| Total Rg | 23.77 Å |
| Atom count | 7796 |
| Residues | 504 |
| Excluded volume | 70131 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d5mb2b1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.1 — TIM beta/alpha-barrel |
| Superfamily Superfamily superfamily | c.1.8 — (Trans)glycosidases |
| Family Family family | c.1.8.1 — Amylase, catalytic domain |
| Domain ID domain_id | d5mb2b2 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.71 — Glycosyl hydrolase domain |
| Superfamily Superfamily superfamily | b.71.1 — Glycosyl hydrolase domain |
| Family Family family | b.71.1.0 — automated matches |
| Domain ID domain_id | 5mb2B01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 20 — Alpha-Beta Barrel |
| Topology topology | 20 — TIM Barrel |
| Homologous superfamily homologous superfamily | 80 — Glycosidases |
| Domain ID domain_id | 5mb2B02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 90 — Alpha-Beta Complex |
| Topology topology | 400 — Oligo-1,6-glucosidase; domain 2 |
| Homologous superfamily homologous superfamily | 10 — Oligo-1,6-glucosidase; Domain 2 |
| Domain ID domain_id | 5mb2B03 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 20 — Single Sheet |
| Topology topology | 220 — Glycosyl hydrolase fold |
| Homologous superfamily homologous superfamily | 10 — alpha-Amylases |