5uk4

VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307

Method: X-RAY DIFFRACTION
▼

1. 蛋白身份与相关结构 Protein Identity & Related Structures

Nucleoprotein

Vesicular stomatitis Indiana virus (strain San Juan)

UniProt P03521

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 20 RNA 2 Anti-vesicular stomatitis virus N VHH × 10 (A0A192B6J6) RNA (45-MER) × 2 与全部聚合物一致
2 蛋白–RNA 异源复合物 蛋白 20 RNA 2 Anti-vesicular stomatitis virus N VHH × 10 (A0A192B6J6) RNA (45-MER) × 2 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 NCAP_VSIVA
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–422; UniProt 1–422 作者链 B; PDB构建体 1–422; UniProt 1–422 作者链 C; PDB构建体 1–422; UniProt 1–422 作者链 D; PDB构建体 1–422; UniProt 1–422 作者链 E; PDB构建体 1–422; UniProt 1–422 作者链 F; PDB构建体 1–422; UniProt 1–422 作者链 G; PDB构建体 1–422; UniProt 1–422 作者链 H; PDB构建体 1–422; UniProt 1–422 作者链 I; PDB构建体 1–422; UniProt 1–422 作者链 J; PDB构建体 1–422; UniProt 1–422 作者链 K; PDB构建体 1–422; UniProt 1–422 作者链 L; PDB构建体 1–422; UniProt 1–422 作者链 M; PDB构建体 1–422; UniProt 1–422 作者链 N; PDB构建体 1–422; UniProt 1–422 作者链 O; PDB构建体 1–422; UniProt 1–422 作者链 P; PDB构建体 1–422; UniProt 1–422 作者链 Q; PDB构建体 1–422; UniProt 1–422 作者链 R; PDB构建体 1–422; UniProt 1–422 作者链 S; PDB构建体 1–422; UniProt 1–422 作者链 T; PDB构建体 1–422; UniProt 1–422

Anti-vesicular stomatitis virus N VHH

Vicugna pacos

UniProt A0A192B6J6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 20 RNA 2 Nucleoprotein × 10 (P03521) RNA (45-MER) × 2 与全部聚合物一致
2 蛋白–RNA 异源复合物 蛋白 20 RNA 2 Nucleoprotein × 10 (P03521) RNA (45-MER) × 2 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A192B6J6_VICPA
Isoform —
PDB实体 2
链与序列区间 作者链 a; PDB构建体 1–125; UniProt 1–125 作者链 b; PDB构建体 1–125; UniProt 1–125 作者链 c; PDB构建体 1–125; UniProt 1–125 作者链 d; PDB构建体 1–125; UniProt 1–125 作者链 e; PDB构建体 1–125; UniProt 1–125 作者链 f; PDB构建体 1–125; UniProt 1–125 作者链 g; PDB构建体 1–125; UniProt 1–125 作者链 h; PDB构建体 1–125; UniProt 1–125 作者链 i; PDB构建体 1–125; UniProt 1–125 作者链 j; PDB构建体 1–125; UniProt 1–125 作者链 k; PDB构建体 1–125; UniProt 1–125 作者链 l; PDB构建体 1–125; UniProt 1–125 作者链 m; PDB构建体 1–125; UniProt 1–125 作者链 n; PDB构建体 1–125; UniProt 1–125 作者链 o; PDB构建体 1–125; UniProt 1–125 作者链 p; PDB构建体 1–125; UniProt 1–125 作者链 q; PDB构建体 1–125; UniProt 1–125 作者链 r; PDB构建体 1–125; UniProt 1–125 作者链 s; PDB构建体 1–125; UniProt 1–125 作者链 t; PDB构建体 1–125; UniProt 1–125

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

▼

2. 结构基本信息 2. Structure Basics

条目编号 entry_id5uk4
沉积日期 deposition_date2017-01-19
结构标题 titleVESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
关键词 keywordsVESICULAR STOMATITIS VIRUS, NUCLEOPROTEIN, INHIBITORY VHH, ANTIVIRAL, Viral Protein-RNA-Immune System complex; Viral Protein/RNA/Immune System
实验方法 methodX-RAY DIFFRACTION
▼

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

5uk4__assembly_2__model_1

Assembly 2 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

5uk4__assembly_2__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

5uk4__assembly_2__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)61.66 Å
Rg(电子密度)61.32 Å
总 Rg61.43 Å
原子数44467
残基数5508
排除体积784860 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 5uk4__assembly_1__model_1 22-meric (22) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 5uk4__assembly_2__model_1 22-meric (22) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
▶

4. 晶体学与实验 4. Crystallography & Experiment

▶

5. 实体与聚合物信息 Entities & Polymers (3)

▼

6. 折叠分类 (SCOP + CATH) 60 domains

CATH v4.4 (60 domains)

结构域编号 domain_id5uk4A01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4A02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4B01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4B02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4C01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4C02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4D01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4D02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4E01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4E02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4F01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4F02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4G01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4G02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4H01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4H02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4I01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4I02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4J01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4J02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4K01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4K02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4L01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4L02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4M01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4M02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4N01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4N02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4O01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4O02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4P01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4P02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4Q01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4Q02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4R01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4R02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4S01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4S02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4T01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3570 — Rhabdovirus nucleoprotein-like fold
同源超家族 H-superfamily homologous superfamily10 — Rhabdovirus nucleocapsid protein like domain
结构域编号 domain_id5uk4T02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3610 — Rhabdovirus nucleoprotein-like
同源超家族 H-superfamily homologous superfamily10 — Nucleoprotein
结构域编号 domain_id5uk4a00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4b00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4c00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4d00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4e00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4f00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4g00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4h00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4i00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4j00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4k00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4l00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4m00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4n00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4o00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4p00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4q00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4r00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4s00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5uk4t00
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
▶

7. 引用文献 (1)