6ch3

Crystal structure of the cytoplasmic domain of FlhA and FliS-FliC complex

Method: X-RAY DIFFRACTION Dmax: 88.0 Å Quality: EXCELLENT

1. Protein Identity and Related Structures Protein Identity & Related Structures

Flagellar biosynthesis protein FlhA

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

UniProt P40729

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 360–690 Not recorded Flagellar secretion chaperone FliS,Flagellin × 1 (P26609,P06179) X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, SITTING DROP;293 K;tascimate Resolution 2.68 Å R-free 0.258

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

8 other PDB entries and 16 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name FLHA_SALTY
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–331; UniProt 360–690

Flagellar secretion chaperone FliS,Flagellin

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

UniProt P06179

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain B; UniProt 455–495 Not recorded Flagellar biosynthesis protein FlhA × 1 (P40729) X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, SITTING DROP;293 K;tascimate Resolution 2.68 Å R-free 0.258

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name FLIC_SALTY
Isoform
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 158–198; UniProt 455–495

Flagellar secretion chaperone FliS,Flagellin

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

UniProt P26609

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Insufficient information Heteromer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain B; UniProt 1–135 Not recorded Flagellar biosynthesis protein FlhA × 1 (P40729) X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, SITTING DROP;293 K;tascimate Resolution 2.68 Å R-free 0.258

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

No other PDB entry for the same UniProt protein was found.

View Construct and Data Evidence
UniProt name FLIS_SALTY
Isoform
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–135; UniProt 1–135

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 6ch3

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 6ch3
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2. Structure Basics 2. Structure Basics

Entry ID entry_id6ch3
Deposition date deposition_date2018-02-21
Structure title titleCrystal structure of the cytoplasmic domain of FlhA and FliS-FliC complex
Keywords keywordsflagellar, STRUCTURAL PROTEIN; STRUCTURAL PROTEIN
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier27.69
Radius of gyration Rg (electron density) rg_electron26.81
Forward intensity I(0) i047026300.00
Molecular weight molecular_weight53457.0 kDa
Excluded volume excluded_volume67205 ų
Envelope volume envelope_volume86258 ų
Hydration-shell volume shell_volume27610 ų
Envelope diameter envelope_diameter93.6
Shell Rg shell_rg33.20
Envelope Rg envelope_rg26.49
Shape Rg shape_rg26.80
Total Rg total_rg27.54
Total atoms total_atoms3759
Residues n_residues486
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax88.0
Rg (real space) rg_real27.67
Rg uncertainty (real space) rg_real_error0.53
I(0) (real space) i0_real4.7030e+07
I(0) uncertainty (real space) i0_real_error6.9750e+05
Rg (reciprocal space) rg_reciprocal27.68
I(0) (reciprocal space) i0_reciprocal47030000.0000
Solution quality estimate total_estimate0.9082
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary34.0
Skewness Skewness skewness0.263
Kurtosis Kurtosis kurtosis-0.495
Angular range angular_range— – 0.2850 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha11320000.0000
Real-space data points n_real_points58
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.948; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.989; Smooth: 0.969

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (3)

7. Fold Classification (SCOP + CATH) 1 domains

CATH v4.4 (1 domains)

Domain ID domain_id6ch3A01
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology30 — Glutaredoxin
Homologous superfamily homologous superfamily60 — FHIPEP family, domain 1

8. Citations (1)

9. Files and Curves (10)