6ddd

Structure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

50S ribosomal protein L19

物种未注明

UniProt A0A077UVB6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077UVB6_STAAU
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–116; UniProt 1–116

50S ribosomal protein L2

物种未注明

UniProt B3VKN3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 B3VKN3_STAAU
Isoform —
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–276; UniProt 1–276

50S ribosomal protein L20

物种未注明

UniProt A0A077VMP6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077VMP6_STAAU
Isoform —
PDB实体 3
链与序列区间 作者链 C; PDB构建体 1–118; UniProt 1–118

50S ribosomal protein L21

物种未注明

UniProt D7URR3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 D7URR3_STAAU
Isoform —
PDB实体 4
链与序列区间 作者链 D; PDB构建体 1–102; UniProt 1–102

50S ribosomal protein L22

物种未注明

UniProt A0A077UKF9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077UKF9_STAAU
Isoform —
PDB实体 5
链与序列区间 作者链 E; PDB构建体 1–116; UniProt 1–116

50S ribosomal protein L23

物种未注明

UniProt W8TUB4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 W8TUB4_STAAU
Isoform —
PDB实体 6
链与序列区间 作者链 F; PDB构建体 1–91; UniProt 1–91

50S ribosomal protein L24

物种未注明

UniProt W8TRD5

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 W8TRD5_STAAU
Isoform —
PDB实体 7
链与序列区间 作者链 G; PDB构建体 1–105; UniProt 1–105

50S ribosomal protein L25

物种未注明

UniProt A0A133Q8Z9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A133Q8Z9_STAAU
Isoform —
PDB实体 8
链与序列区间 作者链 H; PDB构建体 1–217; UniProt 3–219

50S ribosomal protein L27

物种未注明

UniProt A0A077ULC5

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077ULC5_STAAU
Isoform —
PDB实体 9
链与序列区间 作者链 I; PDB构建体 1–85; UniProt 10–94

50S ribosomal protein L28

物种未注明

UniProt A0A077URJ8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077URJ8_STAAU
Isoform —
PDB实体 10
链与序列区间 作者链 J; PDB构建体 1–62; UniProt 1–62

50S ribosomal protein L29

物种未注明

UniProt A0A077W1J5

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077W1J5_STAAU
Isoform —
PDB实体 11
链与序列区间 作者链 K; PDB构建体 1–69; UniProt 1–69

50S ribosomal protein L3

物种未注明

UniProt W8U3W0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 W8U3W0_STAAU
Isoform —
PDB实体 12
链与序列区间 作者链 L; PDB构建体 1–217; UniProt 1–217

50S ribosomal protein L30

物种未注明

UniProt W8UVN7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 W8UVN7_STAAU
Isoform —
PDB实体 13
链与序列区间 作者链 M; PDB构建体 1–59; UniProt 1–59

50S ribosomal protein L32

物种未注明

UniProt A0A077UWR7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UWR7_STAAU
Isoform —
PDB实体 14
链与序列区间 作者链 N; PDB构建体 1–57; UniProt 1–57

50S ribosomal protein L33

物种未注明

UniProt A0A077UXT4

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UXT4_STAAU
Isoform —
PDB实体 15
链与序列区间 作者链 O; PDB构建体 1–49; UniProt 1–49

50S ribosomal protein L34

物种未注明

UniProt T1YD75

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 T1YD75_STAAU
Isoform —
PDB实体 16
链与序列区间 作者链 P; PDB构建体 1–50; UniProt 1–50

50S ribosomal protein L35

物种未注明

UniProt A0A077UL47

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UL47_STAAU
Isoform —
PDB实体 17
链与序列区间 作者链 Q; PDB构建体 1–65; UniProt 1–65

50S ribosomal protein L36

物种未注明

UniProt A0A077UGV8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UGV8_STAAU
Isoform —
PDB实体 18
链与序列区间 作者链 R; PDB构建体 1–37; UniProt 1–37

50S ribosomal protein L4

物种未注明

UniProt A0A166DK89

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A166DK89_STAAU
Isoform —
PDB实体 19
链与序列区间 作者链 S; PDB构建体 1–207; UniProt 1–207

50S ribosomal protein L13

物种未注明

UniProt W8TUE6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 W8TUE6_STAAU
Isoform —
PDB实体 20
链与序列区间 作者链 V; PDB构建体 1–145; UniProt 1–145

50S ribosomal protein L14

物种未注明

UniProt A0A077UUA0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 A0A077UUA0_STAAU
Isoform —
PDB实体 21
链与序列区间 作者链 W; PDB构建体 1–122; UniProt 1–122

50S ribosomal protein L15

物种未注明

UniProt A0A077UGA7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UGA7_STAAU
Isoform —
PDB实体 22
链与序列区间 作者链 X; PDB构建体 1–146; UniProt 1–146

50S ribosomal protein L16

物种未注明

UniProt A0A077V4G0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L17 × 1 (A0A077UG91) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077V4G0_STAAU
Isoform —
PDB实体 23
链与序列区间 作者链 Y; PDB构建体 1–144; UniProt 1–144

50S ribosomal protein L17

物种未注明

UniProt A0A077UG91

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L18 × 1 (W8TRE0) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

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UniProt名称 A0A077UG91_STAAU
Isoform —
PDB实体 24
链与序列区间 作者链 Z; PDB构建体 1–122; UniProt 1–122

50S ribosomal protein L18

物种未注明

UniProt W8TRE0

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白–RNA 异源复合物 蛋白 25 RNA 2 50S ribosomal protein L19 × 1 (A0A077UVB6) 50S ribosomal protein L2 × 1 (B3VKN3) 50S ribosomal protein L20 × 1 (A0A077VMP6) 50S ribosomal protein L21 × 1 (D7URR3) 50S ribosomal protein L22 × 1 (A0A077UKF9) 50S ribosomal protein L23 × 1 (W8TUB4) 50S ribosomal protein L24 × 1 (W8TRD5) 50S ribosomal protein L25 × 1 (A0A133Q8Z9) 50S ribosomal protein L27 × 1 (A0A077ULC5) 50S ribosomal protein L28 × 1 (A0A077URJ8) 50S ribosomal protein L29 × 1 (A0A077W1J5) 50S ribosomal protein L3 × 1 (W8U3W0) 50S ribosomal protein L30 × 1 (W8UVN7) 50S ribosomal protein L32 × 1 (A0A077UWR7) 50S ribosomal protein L33 × 1 (A0A077UXT4) 50S ribosomal protein L34 × 1 (T1YD75) 50S ribosomal protein L35 × 1 (A0A077UL47) 50S ribosomal protein L36 × 1 (A0A077UGV8) 50S ribosomal protein L4 × 1 (A0A166DK89) 50S ribosomal protein L13 × 1 (W8TUE6) 50S ribosomal protein L14 × 1 (A0A077UUA0) 50S ribosomal protein L15 × 1 (A0A077UGA7) 50S ribosomal protein L16 × 1 (A0A077V4G0) 50S ribosomal protein L17 × 1 (A0A077UG91) 23S rRNA × 1 5S rRNA × 1 2,2-dichloro-N-({(5S)-3-[3-fluoro-4-(morpholin-4-yl)phenyl]-2-oxo-1,3-oxazolidin-5-yl}methyl)acetamide × 1 与全部聚合物一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 W8TRE0_STAAU
Isoform —
PDB实体 25
链与序列区间 作者链 a; PDB构建体 1–119; UniProt 1–119

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id6ddd
沉积日期 deposition_date2018-05-10
结构标题 titleStructure of the 50S ribosomal subunit from Methicillin Resistant Staphylococcus aureus in complex with the oxazolidinone antibiotic LZD-5
关键词 keywordsantibiotic complex, linezolid, oxazolidinone, 50S, ribosome, Ribosome-Antibiotic complex; Ribosome/Antibiotic
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

6ddd__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

6ddd__assembly_1__model_1 | I(q)

10-2 10-1 107 108 109 1010 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

6ddd__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)65.97 Å
Rg(电子密度)66.08 Å
总 Rg66.15 Å
原子数79136
残基数5318
排除体积1192200 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 6ddd__assembly_1__model_1 27-meric (27) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (28)

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6. 折叠分类 (SCOP + CATH) 11 domains

CATH v4.4 (11 domains)

结构域编号 domain_id6dddB01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P)
同源超家族 H-superfamily homologous superfamily140 — Nucleic acid-binding proteins
结构域编号 domain_id6dddB03
类 Class class4 — Few Secondary Structures
架构 Architecture architecture10 — Irregular
拓扑 Topology topology950 — Ribosomal protein L2; domain 3
同源超家族 H-superfamily homologous superfamily10 — Ribosomal protein L2, domain 3
结构域编号 domain_id6dddE00
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology470 — Ribosomal Protein L22; Chain A
同源超家族 H-superfamily homologous superfamily10 — Ribosomal protein L22/L17
结构域编号 domain_id6dddF00
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology70 — Alpha-Beta Plaits
同源超家族 H-superfamily homologous superfamily330 — RRM (RNA recognition motif) domain
结构域编号 domain_id6dddH00
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology240 — Ribosomal Protein L25; Chain P
同源超家族 H-superfamily homologous superfamily10 — Ribosomal Protein L25; Chain P
结构域编号 domain_id6dddM00
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology1390 — Ribosomal Protein L30; Chain: A,
同源超家族 H-superfamily homologous superfamily20 — Ribosomal protein L30/L7
结构域编号 domain_id6dddO00
类 Class class2 — Mainly Beta
架构 Architecture architecture20 — Single Sheet
拓扑 Topology topology28 — Rubrerythrin, domain 2
同源超家族 H-superfamily homologous superfamily120 — Ribosomal protein L33
结构域编号 domain_id6dddP00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily3980 —
结构域编号 domain_id6dddW00
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology150 — Ribosomal Protein L14
同源超家族 H-superfamily homologous superfamily20 — Ribosomal protein L14/L23
结构域编号 domain_id6dddY01
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology1170 — Aldehyde Oxidoreductase; domain 3
同源超家族 H-superfamily homologous superfamily10 — Ribosomal protein L16/L10
结构域编号 domain_id6dddZ00
类 Class class3 — Alpha Beta
架构 Architecture architecture90 — Alpha-Beta Complex
拓扑 Topology topology1030 — 50s Ribosomal Protein L17; Chain: A,
同源超家族 H-superfamily homologous superfamily10 — Ribosomal protein L17
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7. 引用文献 (1)