6dec

Crystal structure of Bos taurus Arp2/3 complex binding with C-terminus of Homo sapiens SPIN90

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Actin-related protein 3

物种未注明

UniProt P61157

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARP3_BOVIN
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–418; UniProt 1–418 作者链 H; PDB构建体 1–418; UniProt 1–418

Actin-related protein 2

物种未注明

UniProt A7MB62

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARP2_BOVIN
Isoform —
PDB实体 2
链与序列区间 作者链 B; PDB构建体 1–394; UniProt 1–394 作者链 I; PDB构建体 1–394; UniProt 1–394

Actin-related protein 2/3 complex subunit 1B

物种未注明

UniProt Q58CQ2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARC1B_BOVIN
Isoform —
PDB实体 3
链与序列区间 作者链 C; PDB构建体 1–372; UniProt 1–372 作者链 J; PDB构建体 1–372; UniProt 1–372

Actin-related protein 2/3 complex subunit 2

物种未注明

UniProt Q3MHR7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARPC2_BOVIN
Isoform —
PDB实体 4
链与序列区间 作者链 D; PDB构建体 1–300; UniProt 1–300 作者链 K; PDB构建体 1–300; UniProt 1–300

Actin-related protein 2/3 complex subunit 3

物种未注明

UniProt Q3T035

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARPC3_BOVIN
Isoform —
PDB实体 5
链与序列区间 作者链 E; PDB构建体 1–178; UniProt 1–178 作者链 L; PDB构建体 1–178; UniProt 1–178

Actin-related protein 2/3 complex subunit 4

物种未注明

UniProt Q148J6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARPC4_BOVIN
Isoform —
PDB实体 6
链与序列区间 作者链 F; PDB构建体 1–168; UniProt 1–168 作者链 N; PDB构建体 1–168; UniProt 1–168

Actin-related protein 2/3 complex subunit 5

物种未注明

UniProt Q3SYX9

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) NCK-interacting protein with SH3 domain × 1 (Q9NZQ3) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARPC5_BOVIN
Isoform —
PDB实体 7
链与序列区间 作者链 G; PDB构建体 1–151; UniProt 1–151 作者链 O; PDB构建体 1–151; UniProt 1–151

NCK-interacting protein with SH3 domain

Homo sapiens

UniProt Q9NZQ3

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致
2 蛋白异源复合物 异源复合物 蛋白 8 Actin-related protein 3 × 1 (P61157) Actin-related protein 2 × 1 (A7MB62) Actin-related protein 2/3 complex subunit 1B × 1 (Q58CQ2) Actin-related protein 2/3 complex subunit 2 × 1 (Q3MHR7) Actin-related protein 2/3 complex subunit 3 × 1 (Q3T035) Actin-related protein 2/3 complex subunit 4 × 1 (Q148J6) Actin-related protein 2/3 complex subunit 5 × 1 (Q3SYX9) CALCIUM ION × 2 ADENOSINE-5'-TRIPHOSPHATE × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 SPN90_HUMAN
Isoform —
PDB实体 8
链与序列区间 作者链 M; PDB构建体 2–455; UniProt 269–722 作者链 P; PDB构建体 2–455; UniProt 269–722

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id6dec
沉积日期 deposition_date2018-05-11
结构标题 titleCrystal structure of Bos taurus Arp2/3 complex binding with C-terminus of Homo sapiens SPIN90
关键词 keywordsSPIN90 Arp2-3 complex, actin filament binding interface, linear filament nucleation activation, ENDOCYTOSIS; ENDOCYTOSIS
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

6dec__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

6dec__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

6dec__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)44.90 Å
Rg(电子密度)44.52 Å
总 Rg44.82 Å
原子数10929
残基数2158
排除体积176190 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 6dec__assembly_1__model_1 octameric (8) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 6dec__assembly_2__model_1 octameric (8) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
3 1 6dec__assembly_3__model_1 monomeric (1) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
4 1 6dec__assembly_4__model_1 monomeric (1) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (12)

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7. 引用文献 (1)