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6yi5

In-situ structure of the trimeric HEF from influenza C by flexible fitting into a cryo-ET map.

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Hemagglutinin-esterase-fusion glycoprotein

OrganismNot specified

UniProt P07975

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Homooligomer Protein 6 其他Polymer 9 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 6 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 3 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1flc 6yi5

2 assemblies

View Construct and Data Evidence
UniProt name HEMA_INCJH
Isoform —
PDB entities 1, 2
Chains and sequence ranges Author chain A； PDBConstruct 1–432； UniProt 15–446 Author chain C； PDBConstruct 1–432； UniProt 15–446 Author chain E； PDBConstruct 1–432； UniProt 15–446 Author chain B； PDBConstruct 1–175； UniProt 447–621 Author chain D； PDBConstruct 1–175； UniProt 447–621 Author chain F； PDBConstruct 1–175； UniProt 447–621

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6yi5
Deposition date deposition_date2020-03-31
Structure title titleIn-situ structure of the trimeric HEF from influenza C by flexible fitting into a cryo-ET map.
Keywords keywordsReceptor, esterase, fusion, influenza, VIRAL PROTEIN; VIRAL PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6yi5__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6yi5__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6yi5__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）46.70 Å
Rg (electron density)46.29 Å
Total Rg46.42 Å
Atom count14061
Residues1767
Excluded volume250290 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6yi5__assembly_1__model_1 hexameric （6） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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7. Citations (1)