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7b69

BK Polyomavirus VP1 pentamer core(residues 26-299) mutant C104S

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Major capsid protein VP1

BK polyomavirus

UniProt P03088

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 5 DIMETHYL SULFOXIDE × 13 water × 5 Consistent with protein count
2 Protein homooligomer Homooligomer Protein 5 DIMETHYL SULFOXIDE × 10 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers
5fua 5fua 5fua 5fua 5fua 7b69 7b69 7b6a 7b6c 7b6c 8agh 8ago

15 assemblies; showing the first 12

Heteromeric or nucleic-acid complex
7pa7 7pa7 7zip 9rm2

4 assemblies

View Construct and Data Evidence
UniProt name VP1_POVBK
Isoform —
PDB entities 1
Chains and sequence ranges Author chain AAA； PDBConstruct 2–275； UniProt 27–300 Author chain BBB； PDBConstruct 2–275； UniProt 27–300 Author chain CCC； PDBConstruct 2–275； UniProt 27–300 Author chain DDD； PDBConstruct 2–275； UniProt 27–300 Author chain EEE； PDBConstruct 2–275； UniProt 27–300 Author chain FFF； PDBConstruct 2–275； UniProt 27–300 Author chain GGG； PDBConstruct 2–275； UniProt 27–300 Author chain HHH； PDBConstruct 2–275； UniProt 27–300 Author chain III； PDBConstruct 2–275； UniProt 27–300 Author chain JJJ； PDBConstruct 2–275； UniProt 27–300

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7b69
Deposition date deposition_date2020-12-07
Structure title titleBK Polyomavirus VP1 pentamer core(residues 26-299) mutant C104S
Keywords keywordsViral protein, Polyomavirus, Capsid protein; VIRAL PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7b69__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7b69__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7b69__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）33.00 Å
Rg (electron density)31.82 Å
Total Rg32.59 Å
Atom count10147
Residues1318
Excluded volume179830 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7b69__assembly_1__model_1 pentameric （5） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 7b69__assembly_2__model_1 pentameric （5） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)