Chromosome partition protein MukB
Photorhabdus thracensis
State in the Current Structure
| Assembly | Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Associated Components | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|
| 1 | Protein heterocomplex Heteromer Protein × 14 PDB declaration: tetradecameric(14) Consistent with protein copy count | Chain A1; UniProt 1–1482 Chain A2; UniProt 1–1482 Chain B1; UniProt 1–1482 Chain B2; UniProt 1–1482 | Mutation:E1407Q | Chromosome partition protein MukF × 2 (A0A0F7LMQ4) Chromosome partition protein MukE × 4 (A0A0F7LPV6) Acyl carrier protein × 4 (A0A6D2XA84) PNS 4'-PHOSPHOPANTETHEINE × 4 | ELECTRON MICROSCOPY cryo-EM buffer:pH 7.3 cryo-EM vitrification conditions:Cryogen ETHANE | Resolution 13.00 Å |
Other States of the Same Protein in the Database
Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.
| Other PDB | Difference from Current Entry 7NZ4 | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Method and Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 7NYW Cryo-EM structure of the MukBEF-MatP-DNA head module Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 10 PDB declaration: tetradecameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PNS 4'-PHOSPHOPANTETHEINE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.10 Å |
| 7NYX Cryo-EM structure of the MukBEF-MatP-DNA monomer (closed conformation) Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 10 PDB declaration: tetradecameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PNS 4'-PHOSPHOPANTETHEINE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 4.60 Å |
| 7NYY Cryo-EM structure of the MukBEF monomer Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 8 PDB declaration: octameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q | PNS 4'-PHOSPHOPANTETHEINE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.80 Å |
| 7NYZ Cryo-EM structure of the MukBEF-MatP-DNA monomer (partially open conformation) Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 10 PDB declaration: tetradecameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PNS 4'-PHOSPHOPANTETHEINE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.50 Å |
| 7NZ0 Cryo-EM structure of the MukBEF-MatP-DNA monomer (open conformation) Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 10 PDB declaration: tetradecameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 PNS 4'-PHOSPHOPANTETHEINE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 6.30 Å |
| 7NZ2 Cryo-EM structure of the MukBEF-MatP-DNA tetrad Deposited 2021-03-23 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 36 PDB declaration: 44-meric |
Chain A1
1–1482(1482 aa)
Chain A2
1–1482(1482 aa)
Chain A3
1–1482(1482 aa)
Chain A4
1–1482(1482 aa)
Chain B1
1–1482(1482 aa)
Chain B2
1–1482(1482 aa)
Chain B3
1–1482(1482 aa)
Chain B4
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 8 ATP ADENOSINE-5'-TRIPHOSPHATE × 8 PNS 4'-PHOSPHOPANTETHEINE × 8 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 11.00 Å |
| 7NZ3 Cryo-EM structure of apposed MukBEF-MatP monomers on DNA Deposited 2021-03-23 | Different oligomeric state Different ligand/ion Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 20 PDB declaration: 24-meric |
Chain A1
1–1482(1482 aa)
Chain A2
1–1482(1482 aa)
Chain B1
1–1482(1482 aa)
Chain B2
1–1482(1482 aa)
|
Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q Mutation:E1407Q | MG MAGNESIUM ION × 4 ATP ADENOSINE-5'-TRIPHOSPHATE × 4 PNS 4'-PHOSPHOPANTETHEINE × 4 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7.3
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 11.00 Å |
| 9GM6 MukBEF in a nucleotide-bound state with open neck gate (heads core) Deposited 2024-08-28 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 7 PDB declaration: heptameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Not recorded | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 3.70 Å |
| 9GM7 MukBEF in a nucleotide-bound state with open neck gate (monomer) Deposited 2024-08-28 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 8 PDB declaration: octameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Not recorded | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 4.30 Å |
| 9GM8 MukBEF in a nucleotide-bound state with open neck gate Deposited 2024-08-28 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein heterocomplex Heteromer;Protein × 8 PDB declaration: octameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Not recorded | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 3.90 Å |
| 9GM9 MukBEF in a DNA capture state Deposited 2024-08-28 | Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 9 PDB declaration: 11-meric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
|
Not recorded | MG MAGNESIUM ION × 2 ATP ADENOSINE-5'-TRIPHOSPHATE × 2 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 7.80 Å |
| 9GMA MukBEF in a DNA capture state (dimer) Deposited 2024-08-28 | Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics | Assembly 1 Protein–DNA Heteromer;Protein × 14 PDB declaration: hexadecameric |
Chain A
1–1482(1482 aa)
Chain B
1–1482(1482 aa)
Chain O
1–1482(1482 aa)
Chain P
1–1482(1482 aa)
|
Not recorded | MG MAGNESIUM ION × 4 ATP ADENOSINE-5'-TRIPHOSPHATE × 4 |
ELECTRON MICROSCOPY
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 9.10 Å |
12 other PDB entries and 12 assemblies. Open the comparison page and filter oligomeric states
View Construct and Data Evidence
| UniProt name | A0A0F7LRY2_9GAMM |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A1; PDBConstruct 1–1482; UniProt 1–1482 Author chain A2; PDBConstruct 1–1482; UniProt 1–1482 Author chain B1; PDBConstruct 1–1482; UniProt 1–1482 Author chain B2; PDBConstruct 1–1482; UniProt 1–1482 |