SAXSdb — 7u8t

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1. Protein Identity and Related Structures Protein Identity & Related Structures

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

Chaetomium thermophilum

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Insufficient information	Homooligomer	Protein 2	No other associated polymer	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	G0S0T5_CHATD
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 2–19； UniProt 15–32 Author chain B； PDBConstruct 2–19； UniProt 15–32

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

Chaetomium thermophilum

UniProt G0S3B8

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Insufficient information	Homooligomer	Protein 2	No other associated polymer	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	G0S3B8_CHATD
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 20–711； UniProt 1944–2635 Author chain B； PDBConstruct 20–711； UniProt 1944–2635

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	7u8t
Deposition date deposition_date	2022-03-09
Structure title title	Vps13 adaptor binding domain in complex with Mcp1 PxP motif peptide
Keywords keywords	Adaptor binding domain, LIPID TRANSPORT; LIPID TRANSPORT
Experimental Method method	X-RAY DIFFRACTION

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7u8t__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7u8t__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

7u8t__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	42.72 Å
Rg (electron density)	43.18 Å
Total Rg	43.05 Å
Atom count	8697
Residues	1145
Excluded volume	154260 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`7u8t__assembly_1__model_1`	dimeric （2）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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Unit-cell length a length_a	83.735 Å
Unit-cell length b length_b	91.225 Å
Unit-cell length c length_c	132.769 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	102.16 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	4

Space group space_group	P 1 21 1
Space-group number int_tables_number	4
Crystal system crystal_system	—

Resolution resolution	3.000 Å
Low-resolution limit resolution_low	48.360 Å
R factor r_factor	0.2514
R_work r_work	0.2496
R_free r_free	0.2848

Description description	Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein
Molecular weight formula_weight	81809.3 kDa
Source method src_method	man
Copy count entity_count	2

Polymer type type	polypeptide(L)
Chain IDs strand_id	A,B
Atom count atom_count	8697

Vps13 adaptor binding domain in complex with Mcp1 PxP motif peptide

1. Protein Identity and Related Structures Protein Identity & Related Structures

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

State in the Current Structure

Other States of the Same Protein in the Database

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

State in the Current Structure

Other States of the Same Protein in the Database

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

7u8t__assembly_1__model_1

7u8t__assembly_1__model_1 | I(q)

7u8t__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

Refinement Refinement

Diffraction experiment Diffraction

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)

Source organism organism	Chaetomium thermophilum
NCBI taxonomy ID ncbi_taxonomy_id	209285
Host organism host_organism	Escherichia coli

Vps13 adaptor binding domain in complex with Mcp1 PxP motif peptide

1. Protein Identity and Related Structures Protein Identity & Related Structures

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Mcp1 PxP motif,Putative vacuolar protein sorting-associated protein

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

7u8t__assembly_1__model_1

7u8t__assembly_1__model_1 | I(q)

7u8t__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

Refinement Refinement

Diffraction experiment Diffraction

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)