7wkx

IL-17A in complex with the humanized antibody HB0017

Method: X-RAY DIFFRACTION Dmax: 159.3 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Interleukin-17A

Homo sapiens

UniProt Q16552

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 6 PDB declaration: hexameric(6) Consistent with protein copy count Chain E; UniProt 20–155 Chain F; UniProt 20–155 Not recorded Heavy chain of HB0017 Fab × 2 Light chain of HB0017 Fab × 2 MLA MALONIC ACID × 7 ACY ACETIC ACID × 4 X-RAY DIFFRACTION X-ray crystallization conditions:VAPOR DIFFUSION, SITTING DROP;291 K;4% v/v Tacsimate pH 7.0, 12% w/v Polyethylene glycol 3,350 Resolution 2.81 Å R-free 0.254

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

43 other PDB entries and 56 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name IL17_HUMAN
Isoform
PDB entities 3
Chains and sequence ranges Author chain E; PDBConstruct 16–151; UniProt 20–155 Author chain F; PDBConstruct 16–151; UniProt 20–155

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 7wkx

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 7wkx
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2. Structure Basics 2. Structure Basics

Entry ID entry_id7wkx
Deposition date deposition_date2022-01-12
Structure title titleIL-17A in complex with the humanized antibody HB0017
Keywords keywordsHB0017, IL17A, monoclonal antibody, complex, CYTOKINE; CYTOKINE
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier46.21
Radius of gyration Rg (electron density) rg_electron47.08
Forward intensity I(0) i0209860000.00
Molecular weight molecular_weight116550.0 kDa
Excluded volume excluded_volume144900 ų
Envelope volume envelope_volume207780 ų
Hydration-shell volume shell_volume41004 ų
Envelope diameter envelope_diameter171.5
Shell Rg shell_rg44.12
Envelope Rg envelope_rg47.12
Shape Rg shape_rg47.02
Total Rg total_rg47.14
Total atoms total_atoms8211
Residues n_residues1057
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax159.3
Rg (real space) rg_real46.95
Rg uncertainty (real space) rg_real_error2.30
I(0) (real space) i0_real2.0990e+08
I(0) uncertainty (real space) i0_real_error4.9940e+06
Rg (reciprocal space) rg_reciprocal46.22
I(0) (reciprocal space) i0_reciprocal209700000.0000
Solution quality estimate total_estimate0.7537
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks3
Primary peak position r_peak_primary37.5
Skewness Skewness skewness0.558
Kurtosis Kurtosis kurtosis-0.392
Angular range angular_range— – 0.1700 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha9691000.0000
Real-space data points n_real_points35
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.638; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.666; Smooth: 0.215

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (6)

7. Fold Classification (SCOP + CATH) 8 domains

CATH v4.4 (8 domains)

Domain ID domain_id7wkxA01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxA02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxB01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxB02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxC01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxC02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxD01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id7wkxD02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins

8. Citations (1)

9. Files and Curves (10)