7y3f

Structure of the Anabaena PSI-monomer-IsiA supercomplex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Photosystem I P700 chlorophyll a apoprotein A1

OrganismNot specified

UniProt P58576

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAA_NOSS1
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–752; UniProt 1–752

Photosystem I P700 chlorophyll a apoprotein A2 1

OrganismNot specified

UniProt P58565

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAB1_NOSS1
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–741; UniProt 1–741

Photosystem I iron-sulfur center

OrganismNot specified

UniProt P0A410

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAC_NOSS1
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–81; UniProt 1–81

Photosystem I reaction center subunit II

OrganismNot specified

UniProt P58573

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAD_NOSS1
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–139; UniProt 1–139

Photosystem I reaction center subunit IV

OrganismNot specified

UniProt P58575

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAE_NOSS1
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–70; UniProt 1–70

Photosystem I reaction center subunit III

OrganismNot specified

UniProt P58564

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAF_NOSS1
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–164; UniProt 1–164

Photosystem I reaction center subunit VIII

OrganismNot specified

UniProt P58560

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAI_NOSS1
Isoform —
PDB entities 7
Chains and sequence ranges Author chain I; PDBConstruct 1–46; UniProt 1–46

Photosystem I reaction center subunit IX

OrganismNot specified

UniProt P58568

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAJ_NOSS1
Isoform —
PDB entities 8
Chains and sequence ranges Author chain J; PDBConstruct 1–49; UniProt 1–49

Photosystem I 4.8 kDa protein

OrganismNot specified

UniProt P58566

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PSAX_NOSS1
Isoform —
PDB entities 11
Chains and sequence ranges Author chain X; PDBConstruct 1–44; UniProt 1–44

Photosystem I reaction center subunit XI

OrganismNot specified

UniProt Q8YQ34

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) IsiA × 3 Iron stress-induced chlorophyll-binding protein × 2 (Q8YQ35) CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name Q8YQ34_NOSS1
Isoform —
PDB entities 12
Chains and sequence ranges Author chain 1; PDBConstruct 1–476; UniProt 1–476

Iron stress-induced chlorophyll-binding protein

OrganismNot specified

UniProt Q8YQ35

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 17 Photosystem I P700 chlorophyll a apoprotein A1 × 1 (P58576) Photosystem I P700 chlorophyll a apoprotein A2 1 × 1 (P58565) Photosystem I iron-sulfur center × 1 (P0A410) Photosystem I reaction center subunit II × 1 (P58573) Photosystem I reaction center subunit IV × 1 (P58575) Photosystem I reaction center subunit III × 1 (P58564) Photosystem I reaction center subunit VIII × 1 (P58560) Photosystem I reaction center subunit IX × 1 (P58568) Unknown × 1 PsaM × 1 Photosystem I 4.8 kDa protein × 1 (P58566) Photosystem I reaction center subunit XI × 1 (Q8YQ34) IsiA × 3 CHLOROPHYLL A ISOMER × 1 CHLOROPHYLL A × 155 PHYLLOQUINONE × 2 IRON/SULFUR CLUSTER × 3 BETA-CAROTENE × 29 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE × 4 DODECYL-BETA-D-MALTOSIDE × 6 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE × 1 water × 5 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ISIA_NOSS1
Isoform —
PDB entities 14
Chains and sequence ranges Author chain 4; PDBConstruct 1–344; UniProt 1–344 Author chain 5; PDBConstruct 1–344; UniProt 1–344

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7y3f
Deposition date deposition_date2022-06-10
Structure title titleStructure of the Anabaena PSI-monomer-IsiA supercomplex
Keywords keywordsPhotosystem I, ELECTRON TRANSPORT, isiA, PHOTOSYNTHESIS; PHOTOSYNTHESIS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7y3f__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7y3f__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7y3f__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)58.40 Å
Rg (electron density)56.16 Å
Total Rg56.08 Å
Atom count39437
Residues4112
Excluded volume721820 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7y3f__assembly_1__model_1 heptadecameric (17) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (23)

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7. Citations (1)