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8avx

Cryo-EM structure of DrBphP in Pfr state

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Bacteriophytochrome,Response regulator

Deinococcus radiodurans R1

UniProt Q9RZA4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Homooligomer Protein 2 BILIVERDINE IX ALPHA × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1ztu 3s7q 4cqh 4ijg 4o8g 4y3i 4y5f 4z1w 4zrr 5ajg 5lbr 5nfx

16 assemblies; showing the first 12

Homodimer
2o9b 2o9c 3s7n 3s7o 3s7p 4o01 4o01 4o0p 4q0h 4q0i 4q0j 5c5k

46 assemblies; showing the first 12

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
6fht 8avv 8avw 8avx

4 assemblies

View Construct and Data Evidence
UniProt name BPHY_DEIRA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 15–769； UniProt 1–755 Author chain B； PDBConstruct 15–769； UniProt 1–755

Bacteriophytochrome,Response regulator

Deinococcus radiodurans R1

UniProt Q9RZA5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Homooligomer Protein 2 BILIVERDINE IX ALPHA × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer
6xvu 6xvu

2 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
8avv 8avw 8avx

3 assemblies

View Construct and Data Evidence
UniProt name Q9RZA5_DEIRA
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 782–930； UniProt 1–149 Author chain B； PDBConstruct 782–930； UniProt 1–149

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8avx
Deposition date deposition_date2022-08-27
Structure title titleCryo-EM structure of DrBphP in Pfr state
Keywords keywordsKINASE, PHOTOSENSOR, TRANSFERASE, PHYTOCHROME; TRANSFERASE
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8avx__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8avx__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8avx__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）34.26 Å
Rg (electron density)33.30 Å
Total Rg33.90 Å
Atom count7427
Residues961
Excluded volume131820 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8avx__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)